Issues

• Does ONCOCNV work with probe base library designated BAM files

  BoevaLab/ONCOCNV#16 · Filter by author shahgen opened on Dec 4, 2024
  1

• Raw data unavailable

  BoevaLab/ONCOCNV#15 · Filter by author valeandri opened on Feb 23, 2024

• Queries on applying ONCOCNV on Exome Seq Data

  BoevaLab/ONCOCNV#14 · Filter by author vyomeshj209 opened on Jan 26, 2022
  7

• Error in if (length(which(observations == 0))/length(observations) > 0.3) { : missing value where TRUE/FALSE needed

  BoevaLab/ONCOCNV#13 · Filter by author mishraa31 opened on Jan 19, 2022
  1

• Error in t.test.default((values)/sigma[indLargeSeg], mu = 0) : not enough 'x' observations Calls: t.test -> t.test.default In addition: There were 50 or more warnings (use warnings() to see the first 50) Execution halted

  BoevaLab/ONCOCNV#12 · Filter by author ruochenj opened on Jun 23, 2021
  1

• Running ONCOCNV gets different copy number prediction / p value each time

  BoevaLab/ONCOCNV#11 · Filter by author ruochenj opened on Jun 23, 2021

• Error in mvnX when running processSamples.R of OncoCNV

  BoevaLab/ONCOCNV#10 · Filter by author mwarrier123 opened on Dec 5, 2019

• no output from ONCOCNV_getCounts.pl

  BoevaLab/ONCOCNV#9 · Filter by author ramakrishnas opened on Sep 30, 2019

• understanding the output of the tool

  BoevaLab/ONCOCNV#8 · Filter by author sbaheti opened on Mar 28, 2019
  5

• Usability on large sample sizes

  BoevaLab/ONCOCNV#7 · Filter by author rsteinfe1 opened on Jun 14, 2018

• Problem preping stats from bam files ONCOCNV_getCounts.pl line 450

  BoevaLab/ONCOCNV#5 · Filter by author kmavrommatis opened on Mar 23, 2017
  1

• Error while running OnCOCNV

  BoevaLab/ONCOCNV#4 · Filter by author Nitin123-4 opened on Feb 17, 2017
  1

• Illegal division by zero error in ONCOCNV_getCounts.pl

  BoevaLab/ONCOCNV#3 · Filter by author smrwf opened on Nov 3, 2016
  1

• various issues "span too small",

  BoevaLab/ONCOCNV#1 · Filter by author arnoldliaoILMN opened on Aug 17, 2016