From df4ced04f265f99380e6636475ac2fea083abff6 Mon Sep 17 00:00:00 2001 From: "marcin p. joachimiak" <4625870+realmarcin@users.noreply.github.com> Date: Fri, 14 Aug 2026 21:45:35 -0700 Subject: [PATCH 1/3] Fold the two rarest interaction types so the palette clears tritanopia too (#532) MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Decision on #532: fold the two rarest interaction types into "Other". The module docstring of test_network_palette.py stated the constraint that made this necessary: "no nine-colour set survives all three deficiency types at once". The palette shipped with four documented tritan collisions as the price, and the worst was CROSS_FEEDING vs MUTUALISM at delta-E 1.8 — the two commonest types in the KB, indistinguishable to a tritanope. Seven colours do survive. Folding is what makes it possible, but it is not by itself the fix, and it is worth being clear about that: the two rarest types are STRAIN_COMPETITION (1 occurrence) and PREDATION (11, against 67 for the next-rarest coloured type), while the failing pair was the two commonest. What folding buys is the magenta region those two occupied — which is exactly where MUTUALISM had to move, because under tritanopia every blue converges on the teal of CROSS_FEEDING. MUTUALISM #56bbe6 -> #9f2ebb. Result, measured with the module's own Vienot-Brettel-Mollon projection and CIE76 distances: normal 15.4 protan 17.0 deutan 15.7 (floor 15.0) CROSS_FEEDING/MUTUALISM under tritan: 1.8 -> 68.4 tritan collisions between interaction types: 2 -> 0 contrast 5.86:1 on light, 3.13:1 on dark (floor 1.9) The one remaining tritan collision is SYNTROPHY against the grey taxon node, which shape already separates: taxa are circles and every interaction is a non-circular symbol (#270). The test now asserts zero collisions BETWEEN interaction types and ratchets the documented total from 4 to 1. The enum keeps all nine values — records still use them, and folded types render with the grey "Other" swatch the template already had for unmapped keys. FOLDED is explicit and reasoned so a newly added enum value still fails rather than silently rendering grey, which is the defect this module was written for. test_folded_types_are_still_the_rare_ones re-derives the usage counts from the KB, so the justification cannot rot: if a folded type becomes common, or a coloured type becomes rarer than a folded one, it goes red. Not verified here: the dataviz rubric's own OKLab validator, whose script is not present in this environment. That check reported the original delta-E 10.3 normal-vision failure and should be re-run when available. The two metrics disagree on that pair — CIE76 puts it at 41.1 — and the issue's proposed re-step (#edab12 -> #b8860b) fails THIS module's deutan floor at 1.5 against COMMENSALISM, so it could not be taken as offered. Co-Authored-By: Claude Opus 5 --- .../AMD_Acidophile_Heterotroph_Network.html | 12 +-- .../AMD_Nitrososphaerota_Archaeal.html | 12 +-- ...c_Methanotrophic_Syntrophic_Consortia.html | 10 +-- ...ME_SRB_Marine_Methane_Seep_Consortium.html | 10 +-- ...alborg_East_Full_Scale_EBPR_Community.html | 10 +-- ...lostridium_CO2_Electrolysis_Coculture.html | 10 +-- ...Dechlorination_Groundwater_Enrichment.html | 10 +-- ...ic_Denitrification_Disturbance_SynCom.html | 10 +-- .../Aerobic_Denitrification_QQ_SynCom.html | 10 +-- ...undra_Permafrost_Iron_Redox_Community.html | 10 +-- ...ler_Flora_Gnotobiotic_Mouse_Community.html | 12 +-- ...robic_Digestion_Methanogen_Consortium.html | 10 +-- ...eactor_DNRA_Destabilization_Community.html | 10 +-- ...anule_Metabolic_Interaction_Community.html | 10 +-- ...lasmata_CuMMO_Soil_Sediment_Community.html | 10 +-- .../Arabidopsis_Coumarin_Root_SynCom.html | 10 +-- .../Arabidopsis_Phyllosphere_SynCom7.html | 10 +-- ...il_Methanogenesis_Substrate_Community.html | 10 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.../Rice_Acid_Soil_Bioinoculant_SynCom.html | 12 +-- .../Rice_Duckweed_Bacillus_SynCom.html | 12 +-- .../Rice_P_Uptake_Intercropping_SynCom4.html | 12 +-- .../Richmond_Mine_AMD_Biofilm.html | 12 +-- .../Rifle_Aquifer_Bioanode_EET_Community.html | 10 +-- .../Rifle_Uranium_Reducing_Community.html | 12 +-- .../communities/SF356_Cellulose_Degrader.html | 12 +-- ...UMIx_Human_Intestinal_Model_Community.html | 10 +-- .../SMutans_CAlbicans_ECC_Biofilm.html | 12 +-- .../SMutans_SSputigena_ECC_Pathobiont.html | 10 +-- .../SMutans_VParvula_ASC_Biofilm.html | 10 +-- ...CE_Peatland_Methane_Cycling_Community.html | 10 +-- .../SPRUCE_Peatland_Warming_Community.html | 18 ++-- ...ch_Inlet_OMZ_Redox_Gradient_Community.html | 10 +-- ...bacter_Lignocellulose_Detox_Coculture.html | 10 +-- ..._Chlamydomonas_Fungal_Algal_Mutualism.html | 10 +-- ...Salar_Atacama_Lithium_Brine_Community.html | 12 +-- ...wanella_Denitrifying_Richness_SynComs.html | 10 +-- ...ter_Exoelectrogenic_Biofilm_Community.html | 12 +-- ...trosyntrophic_Denitrifying_Consortium.html | 10 +-- ...eptococcus_Starch_Microbial_Fuel_Cell.html | 10 +-- ...palustris_Electrosyntrophic_Coculture.html | 10 +-- .../SkinCom_Synthetic_Skin_Community.html | 10 +-- ...BGC_Phylum_Depth_Vegetation_Community.html | 10 +-- ..._Nanoarchaea_Rare_Biosphere_Community.html | 10 +-- ...oil_Corrinoid_B12_Reservoir_Community.html | 10 +-- docs/communities/Sorghum_SRC1_Subset.html | 12 +-- ...lt_Pond_Methane_Restoration_Community.html | 10 +-- ...rophyll_Selected_Biofertilizer_SynCom.html | 10 +-- .../Soybean_N_Fixation_sfSynCom.html | 12 +-- ...s_Lignin_Dimer_Valorization_Coculture.html | 10 +-- ...thylotrophic_Methanogenesis_Community.html | 10 +-- ...e_Carboxydocella_CO_Aquifer_Community.html | 10 +-- ...illus_Thiamine_Ectomycorrhizal_SynCom.html | 12 +-- ...ulfide_Spring_Autotrophic_CPR_Biofilm.html | 10 +-- ...SynComBac10_Chicken_Intestinal_SynCom.html | 10 +-- ...ynCom_ARC_Peanut_Aflatoxin_Nodulation.html | 10 +-- ..._BsBv_Cigar_Tobacco_Leaf_Fermentation.html | 12 +-- ...kiniana_Biogas_Slurry_Coupling_System.html | 10 +-- ...obacteria_Sugarcane_Stress_Resilience.html | 12 +-- ...s_Rahnella_Artemisia_Phytoremediation.html | 10 +-- ...Com_Sesame_Flavor_Baijiu_Fuqu_13Genus.html | 10 +-- ...Bacillus_Biofilm_Biocontrol_Coculture.html | 12 +-- ...Azotobacter_Photoproduction_Mutualism.html | 12 +-- .../Synechococcus_Bacillus_SPC.html | 10 +-- docs/communities/Synechococcus_Ecoli_SPC.html | 10 +-- ..._Halomonas_Light_Driven_PHB_Coculture.html | 10 +-- ...us_Pseudomonas_PhotoPHA_DNT_Coculture.html | 12 +-- ...a_Dlactate_Biophotovoltaic_Consortium.html | 10 +-- .../Synechococcus_Yarrowia_SPC.html | 10 +-- ...n_Synechococcus_Rhodotorula_Coculture.html | 12 +-- ...nthetic_Periphyton_Freshwater_Biofilm.html | 10 +-- ...ophobacter_Methanobacterium_Syntrophy.html | 10 +-- ...ophobacter_Methanospirillum_Syntrophy.html | 10 +-- ...utyrate_Growth_Coordination_Coculture.html | 12 +-- ...rophomonas_Methanospirillum_Syntrophy.html | 10 +-- .../Syntrophus_Benzoate_Degrader.html | 10 +-- ...pirillum_Gentianae_Benzoate_Coculture.html | 10 +-- .../THOR_Rhizosphere_Model_Community.html | 10 +-- .../TYQ1_Nematode_Biocontrol_SynCom.html | 12 +-- .../Teosinte_Maize_Biofertilizer_SynCom7.html | 12 +-- ...ra_Marinobacter_Marine_Snow_Coculture.html | 10 +-- ...iosira_Ruegeria_Phycosphere_Coculture.html | 10 +-- ...rmobacter_Acetate_Oxidation_Coculture.html | 10 +-- ...ose_Composting_SynCom_Biosanitization.html | 10 +-- .../Thermophilic_Pyrite_QS_Consortium.html | 12 +-- ...ldococcus_Hyperthermophilic_Syntrophy.html | 10 +-- ...pia_Thiobacillus_Bioreactor_Community.html | 10 +-- .../Tinto_River_Iron_Cycling_Community.html | 12 +-- ...Tobacco_Chemotactic_Biocontrol_SynCom.html | 10 +-- docs/communities/Tomato_Oxylipin_SynCom3.html | 12 +-- ...henol_Anaerobic_Bioremediation_SynCom.html | 10 +-- ...s_Methanospirillum_Butyrate_Coculture.html | 10 +-- ...Ecoli_Cellulosic_Isobutanol_Coculture.html | 10 +-- .../Trichoderma_Lactate_Platform.html | 10 +-- ...myces_Filamentous_Cellulose_Coculture.html | 10 +-- ...desmium_Alteromonas_Marine_Consortium.html | 12 +-- .../Urine_Nitrification_SynCom.html | 10 +-- ...ptococcus_Vitamin_Mutualism_Microcosm.html | 12 +-- ...termelon_Rhizosphere_Fusarium_SynCom8.html | 12 +-- ...xygen_Sulfate_GHG_Microcosm_Community.html | 10 +-- docs/communities/Wheat_Consortium_C1.html | 12 +-- docs/communities/Wheat_Consortium_C6.html | 12 +-- ...heat_Straw_Biogas_Pretreatment_SynCom.html | 12 +-- .../Yogurt_TwoSpecies_Starter_Culture.html | 12 +-- ...li_Exometabolomics_Obligate_Mutualism.html | 12 +-- .../hCom2_Complex_Gut_Microbiome.html | 10 +-- docs/communities/mCAFEs_Brachypodium_RCC.html | 10 +-- src/communitymech/templates/community.html | 6 +- tests/test_network_palette.py | 82 +++++++++++++++++-- 309 files changed, 1134 insertions(+), 2294 deletions(-) diff --git a/docs/communities/AMD_Acidophile_Heterotroph_Network.html b/docs/communities/AMD_Acidophile_Heterotroph_Network.html index bd18ff1c2..77aaea91c 100644 --- a/docs/communities/AMD_Acidophile_Heterotroph_Network.html +++ b/docs/communities/AMD_Acidophile_Heterotroph_Network.html @@ -787,7 +787,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1526,14 +1526,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1546,9 +1544,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/AMD_Nitrososphaerota_Archaeal.html b/docs/communities/AMD_Nitrososphaerota_Archaeal.html index 5f007d164..b21084f58 100644 --- a/docs/communities/AMD_Nitrososphaerota_Archaeal.html +++ b/docs/communities/AMD_Nitrososphaerota_Archaeal.html @@ -694,7 +694,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Environmental Factors (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1400,9 +1398,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/ANME_SRB_Anaerobic_Methanotrophic_Syntrophic_Consortia.html b/docs/communities/ANME_SRB_Anaerobic_Methanotrophic_Syntrophic_Consortia.html index b570f7634..02f0d5ca5 100644 --- a/docs/communities/ANME_SRB_Anaerobic_Methanotrophic_Syntrophic_Consortia.html +++ b/docs/communities/ANME_SRB_Anaerobic_Methanotrophic_Syntrophic_Consortia.html @@ -963,14 +963,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -983,9 +981,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/ANME_SRB_Marine_Methane_Seep_Consortium.html b/docs/communities/ANME_SRB_Marine_Methane_Seep_Consortium.html index 5b06fe275..031e43c09 100644 --- a/docs/communities/ANME_SRB_Marine_Methane_Seep_Consortium.html +++ b/docs/communities/ANME_SRB_Marine_Methane_Seep_Consortium.html @@ -1057,14 +1057,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1077,9 +1075,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Aalborg_East_Full_Scale_EBPR_Community.html b/docs/communities/Aalborg_East_Full_Scale_EBPR_Community.html index e903b5bea..05b60a0c8 100644 --- a/docs/communities/Aalborg_East_Full_Scale_EBPR_Community.html +++ b/docs/communities/Aalborg_East_Full_Scale_EBPR_Community.html @@ -1039,14 +1039,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1059,9 +1057,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Acetobacterium_Clostridium_CO2_Electrolysis_Coculture.html b/docs/communities/Acetobacterium_Clostridium_CO2_Electrolysis_Coculture.html index 3f809fc7a..ecbf95703 100644 --- a/docs/communities/Acetobacterium_Clostridium_CO2_Electrolysis_Coculture.html +++ b/docs/communities/Acetobacterium_Clostridium_CO2_Electrolysis_Coculture.html @@ -1165,14 +1165,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1185,9 +1183,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Acetylene_Fueled_TCE_Dechlorination_Groundwater_Enrichment.html b/docs/communities/Acetylene_Fueled_TCE_Dechlorination_Groundwater_Enrichment.html index 345d513b2..573aa3597 100644 --- a/docs/communities/Acetylene_Fueled_TCE_Dechlorination_Groundwater_Enrichment.html +++ b/docs/communities/Acetylene_Fueled_TCE_Dechlorination_Groundwater_Enrichment.html @@ -845,14 +845,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -865,9 +863,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Aerobic_Denitrification_Disturbance_SynCom.html b/docs/communities/Aerobic_Denitrification_Disturbance_SynCom.html index a9ce9aad0..e919533f0 100644 --- a/docs/communities/Aerobic_Denitrification_Disturbance_SynCom.html +++ b/docs/communities/Aerobic_Denitrification_Disturbance_SynCom.html @@ -763,14 +763,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -783,9 +781,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Aerobic_Denitrification_QQ_SynCom.html b/docs/communities/Aerobic_Denitrification_QQ_SynCom.html index d95212fd5..8c02d42c9 100644 --- a/docs/communities/Aerobic_Denitrification_QQ_SynCom.html +++ b/docs/communities/Aerobic_Denitrification_QQ_SynCom.html @@ -750,14 +750,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -770,9 +768,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Alaska_Tundra_Permafrost_Iron_Redox_Community.html b/docs/communities/Alaska_Tundra_Permafrost_Iron_Redox_Community.html index b3c5ab361..b74dd8979 100644 --- a/docs/communities/Alaska_Tundra_Permafrost_Iron_Redox_Community.html +++ b/docs/communities/Alaska_Tundra_Permafrost_Iron_Redox_Community.html @@ -959,14 +959,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -979,9 +977,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Altered_Schaedler_Flora_Gnotobiotic_Mouse_Community.html b/docs/communities/Altered_Schaedler_Flora_Gnotobiotic_Mouse_Community.html index d59ecca04..5cda5e795 100644 --- a/docs/communities/Altered_Schaedler_Flora_Gnotobiotic_Mouse_Community.html +++ b/docs/communities/Altered_Schaedler_Flora_Gnotobiotic_Mouse_Community.html @@ -649,7 +649,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1018,9 +1016,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Anabaena_MGS1_Anaerobic_Digestion_Methanogen_Consortium.html b/docs/communities/Anabaena_MGS1_Anaerobic_Digestion_Methanogen_Consortium.html index 02e693b61..ef26dd185 100644 --- a/docs/communities/Anabaena_MGS1_Anaerobic_Digestion_Methanogen_Consortium.html +++ b/docs/communities/Anabaena_MGS1_Anaerobic_Digestion_Methanogen_Consortium.html @@ -929,14 +929,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -949,9 +947,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Anammox_Bioreactor_DNRA_Destabilization_Community.html b/docs/communities/Anammox_Bioreactor_DNRA_Destabilization_Community.html index 4e4c50598..ee44a528c 100644 --- a/docs/communities/Anammox_Bioreactor_DNRA_Destabilization_Community.html +++ b/docs/communities/Anammox_Bioreactor_DNRA_Destabilization_Community.html @@ -807,14 +807,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -827,9 +825,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Anammox_Granule_Metabolic_Interaction_Community.html b/docs/communities/Anammox_Granule_Metabolic_Interaction_Community.html index 5173757d6..ca4341dbb 100644 --- a/docs/communities/Anammox_Granule_Metabolic_Interaction_Community.html +++ b/docs/communities/Anammox_Granule_Metabolic_Interaction_Community.html @@ -1031,14 +1031,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1051,9 +1049,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Angelarchaeales_Thermoplasmata_CuMMO_Soil_Sediment_Community.html b/docs/communities/Angelarchaeales_Thermoplasmata_CuMMO_Soil_Sediment_Community.html index 4f5865b94..e637e56cb 100644 --- a/docs/communities/Angelarchaeales_Thermoplasmata_CuMMO_Soil_Sediment_Community.html +++ b/docs/communities/Angelarchaeales_Thermoplasmata_CuMMO_Soil_Sediment_Community.html @@ -790,14 +790,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -810,9 +808,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Arabidopsis_Coumarin_Root_SynCom.html b/docs/communities/Arabidopsis_Coumarin_Root_SynCom.html index 857475f51..b45d5af9b 100644 --- a/docs/communities/Arabidopsis_Coumarin_Root_SynCom.html +++ b/docs/communities/Arabidopsis_Coumarin_Root_SynCom.html @@ -674,14 +674,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -694,9 +692,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Arabidopsis_Phyllosphere_SynCom7.html b/docs/communities/Arabidopsis_Phyllosphere_SynCom7.html index 745178599..3839c8402 100644 --- a/docs/communities/Arabidopsis_Phyllosphere_SynCom7.html +++ b/docs/communities/Arabidopsis_Phyllosphere_SynCom7.html @@ -705,14 +705,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -725,9 +723,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Asgard_Wetland_Soil_Methanogenesis_Substrate_Community.html b/docs/communities/Asgard_Wetland_Soil_Methanogenesis_Substrate_Community.html index 82b9d6b81..7704990aa 100644 --- a/docs/communities/Asgard_Wetland_Soil_Methanogenesis_Substrate_Community.html +++ b/docs/communities/Asgard_Wetland_Soil_Methanogenesis_Substrate_Community.html @@ -921,14 +921,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -941,9 +939,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/At_RSPHERE_SynCom.html b/docs/communities/At_RSPHERE_SynCom.html index 89a3a6d78..53741262c 100644 --- a/docs/communities/At_RSPHERE_SynCom.html +++ b/docs/communities/At_RSPHERE_SynCom.html @@ -710,7 +710,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1397,14 +1397,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1417,9 +1415,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Australian_Lead_Zinc_Polymetallic.html b/docs/communities/Australian_Lead_Zinc_Polymetallic.html index b632abdaa..ae4b7d84a 100644 --- a/docs/communities/Australian_Lead_Zinc_Polymetallic.html +++ b/docs/communities/Australian_Lead_Zinc_Polymetallic.html @@ -789,7 +789,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Environmental Factors (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1722,9 +1720,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Avena_Rhizosphere_CrossKingdom_SIP_Community.html b/docs/communities/Avena_Rhizosphere_CrossKingdom_SIP_Community.html index df3d51703..6c0ff1851 100644 --- a/docs/communities/Avena_Rhizosphere_CrossKingdom_SIP_Community.html +++ b/docs/communities/Avena_Rhizosphere_CrossKingdom_SIP_Community.html @@ -653,7 +653,7 @@

Ecological Interactions

Ecological interaction network for Avena Rhizosphere Cross-Kingdom 13C-SIP Community - Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (commensalism, predation). + Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (commensalism).
@@ -666,8 +666,8 @@

Ecological Interactions

Predation + aria-hidden="true" data-symbol="symbolTriangle2" + data-color="#929caa"> Other
@@ -999,14 +999,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1019,9 +1017,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Avena_Rhizosphere_Detritusphere_Niche_Succession.html b/docs/communities/Avena_Rhizosphere_Detritusphere_Niche_Succession.html index fabd2434c..e15a20648 100644 --- a/docs/communities/Avena_Rhizosphere_Detritusphere_Niche_Succession.html +++ b/docs/communities/Avena_Rhizosphere_Detritusphere_Niche_Succession.html @@ -797,14 +797,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -817,9 +815,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BSFL_Gut_SynCom_Bacillus_Lactobacillus_Issatchenkia.html b/docs/communities/BSFL_Gut_SynCom_Bacillus_Lactobacillus_Issatchenkia.html index 42cbd2653..29e6ca2f6 100644 --- a/docs/communities/BSFL_Gut_SynCom_Bacillus_Lactobacillus_Issatchenkia.html +++ b/docs/communities/BSFL_Gut_SynCom_Bacillus_Lactobacillus_Issatchenkia.html @@ -808,14 +808,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -828,9 +826,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Bacillus_Bradyrhizobium_Straw_Humification_SynCom.html b/docs/communities/Bacillus_Bradyrhizobium_Straw_Humification_SynCom.html index 0319f62ff..af117a1c1 100644 --- a/docs/communities/Bacillus_Bradyrhizobium_Straw_Humification_SynCom.html +++ b/docs/communities/Bacillus_Bradyrhizobium_Straw_Humification_SynCom.html @@ -653,14 +653,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -673,9 +671,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Bacteroides_Eubacterium_Gnotobiotic_Gut_Model.html b/docs/communities/Bacteroides_Eubacterium_Gnotobiotic_Gut_Model.html index 99eed56f1..c82353e06 100644 --- a/docs/communities/Bacteroides_Eubacterium_Gnotobiotic_Gut_Model.html +++ b/docs/communities/Bacteroides_Eubacterium_Gnotobiotic_Gut_Model.html @@ -1003,14 +1003,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1023,9 +1021,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Bacteroides_Methanobrevibacter_Gnotobiotic_Mouse_Mutualism.html b/docs/communities/Bacteroides_Methanobrevibacter_Gnotobiotic_Mouse_Mutualism.html index 805089a7a..ffff87ffd 100644 --- a/docs/communities/Bacteroides_Methanobrevibacter_Gnotobiotic_Mouse_Mutualism.html +++ b/docs/communities/Bacteroides_Methanobrevibacter_Gnotobiotic_Mouse_Mutualism.html @@ -603,7 +603,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -979,9 +977,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Banana_Fusarium_Biocontrol_SynCom12.html b/docs/communities/Banana_Fusarium_Biocontrol_SynCom12.html index a3ab8e8f2..cbdaadc93 100644 --- a/docs/communities/Banana_Fusarium_Biocontrol_SynCom12.html +++ b/docs/communities/Banana_Fusarium_Biocontrol_SynCom12.html @@ -583,7 +583,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -763,14 +763,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -783,9 +781,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Bay_Area_Sewage_SARS_CoV2_Surveillance_Community.html b/docs/communities/Bay_Area_Sewage_SARS_CoV2_Surveillance_Community.html index 9f7ba31b8..8463093f7 100644 --- a/docs/communities/Bay_Area_Sewage_SARS_CoV2_Surveillance_Community.html +++ b/docs/communities/Bay_Area_Sewage_SARS_CoV2_Surveillance_Community.html @@ -710,14 +710,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -730,9 +728,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Bayan_Obo_REE_Tailings_Consortium.html b/docs/communities/Bayan_Obo_REE_Tailings_Consortium.html index 175e878fa..587e438cd 100644 --- a/docs/communities/Bayan_Obo_REE_Tailings_Consortium.html +++ b/docs/communities/Bayan_Obo_REE_Tailings_Consortium.html @@ -591,7 +591,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Environmental Factors (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1230,9 +1228,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Bifidobacterium_Ruminococcus_Infant_HMO_CrossFeeding.html b/docs/communities/Bifidobacterium_Ruminococcus_Infant_HMO_CrossFeeding.html index 5f17be2e3..69eb8e813 100644 --- a/docs/communities/Bifidobacterium_Ruminococcus_Infant_HMO_CrossFeeding.html +++ b/docs/communities/Bifidobacterium_Ruminococcus_Infant_HMO_CrossFeeding.html @@ -785,14 +785,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -805,9 +803,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Bifidobacterium_Trichomonas_Vaginal_Coculture.html b/docs/communities/Bifidobacterium_Trichomonas_Vaginal_Coculture.html index 516dcbe07..38883dca7 100644 --- a/docs/communities/Bifidobacterium_Trichomonas_Vaginal_Coculture.html +++ b/docs/communities/Bifidobacterium_Trichomonas_Vaginal_Coculture.html @@ -557,7 +557,7 @@

Ecological Interactions

Ecological interaction network for Bifidobacterium breve-Trichomonas vaginalis Vaginal Co-culture - Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (commensalism, predation). + Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (commensalism).
@@ -570,8 +570,8 @@

Ecological Interactions

Predation + aria-hidden="true" data-symbol="symbolTriangle2" + data-color="#929caa"> Other
@@ -915,14 +915,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -935,9 +933,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BioAsteroid_ISS_Chondrite_Biomining_Consortium.html b/docs/communities/BioAsteroid_ISS_Chondrite_Biomining_Consortium.html index 7f3a19c0a..a64321845 100644 --- a/docs/communities/BioAsteroid_ISS_Chondrite_Biomining_Consortium.html +++ b/docs/communities/BioAsteroid_ISS_Chondrite_Biomining_Consortium.html @@ -1211,14 +1211,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1231,9 +1229,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BioModels_MODEL1806250003_Spittlebug_Sulcia_Sodalis.html b/docs/communities/BioModels_MODEL1806250003_Spittlebug_Sulcia_Sodalis.html index 0fb32d530..74b35cd00 100644 --- a/docs/communities/BioModels_MODEL1806250003_Spittlebug_Sulcia_Sodalis.html +++ b/docs/communities/BioModels_MODEL1806250003_Spittlebug_Sulcia_Sodalis.html @@ -514,7 +514,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -779,14 +779,12 @@

External Resources

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -799,9 +797,7 @@

External Resources

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BioModels_MODEL1806250004_Sharpshooter_Sulcia_Baumannia.html b/docs/communities/BioModels_MODEL1806250004_Sharpshooter_Sulcia_Baumannia.html index 90031b784..28311f26e 100644 --- a/docs/communities/BioModels_MODEL1806250004_Sharpshooter_Sulcia_Baumannia.html +++ b/docs/communities/BioModels_MODEL1806250004_Sharpshooter_Sulcia_Baumannia.html @@ -514,7 +514,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -779,14 +779,12 @@

External Resources

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -799,9 +797,7 @@

External Resources

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BioModels_MODEL1806250005_Cicada_Sulcia_Hodgkinia.html b/docs/communities/BioModels_MODEL1806250005_Cicada_Sulcia_Hodgkinia.html index 824e79b2b..e37d14d94 100644 --- a/docs/communities/BioModels_MODEL1806250005_Cicada_Sulcia_Hodgkinia.html +++ b/docs/communities/BioModels_MODEL1806250005_Cicada_Sulcia_Hodgkinia.html @@ -514,7 +514,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -779,14 +779,12 @@

External Resources

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -799,9 +797,7 @@

External Resources

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BioModels_MODEL2204300001_Kefir_Community_Model.html b/docs/communities/BioModels_MODEL2204300001_Kefir_Community_Model.html index bf4b6d113..1decee86f 100644 --- a/docs/communities/BioModels_MODEL2204300001_Kefir_Community_Model.html +++ b/docs/communities/BioModels_MODEL2204300001_Kefir_Community_Model.html @@ -729,7 +729,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1189,14 +1189,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1209,9 +1207,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BioModels_MODEL2209060002_DPigrum_SAureus_Community.html b/docs/communities/BioModels_MODEL2209060002_DPigrum_SAureus_Community.html index 7f46aacc0..cba18b98c 100644 --- a/docs/communities/BioModels_MODEL2209060002_DPigrum_SAureus_Community.html +++ b/docs/communities/BioModels_MODEL2209060002_DPigrum_SAureus_Community.html @@ -863,14 +863,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -883,9 +881,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BioModels_MODEL2405300001_Infant_Gut_HMO_SynCom.html b/docs/communities/BioModels_MODEL2405300001_Infant_Gut_HMO_SynCom.html index 06a307503..8ee82ca11 100644 --- a/docs/communities/BioModels_MODEL2405300001_Infant_Gut_HMO_SynCom.html +++ b/docs/communities/BioModels_MODEL2405300001_Infant_Gut_HMO_SynCom.html @@ -1208,14 +1208,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1228,9 +1226,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BioModels_MODEL2407300002_Sponge_Holobiont_Network.html b/docs/communities/BioModels_MODEL2407300002_Sponge_Holobiont_Network.html index 45b241b2a..6f63c9229 100644 --- a/docs/communities/BioModels_MODEL2407300002_Sponge_Holobiont_Network.html +++ b/docs/communities/BioModels_MODEL2407300002_Sponge_Holobiont_Network.html @@ -576,7 +576,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
External Resources (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -920,9 +918,7 @@

External Resources

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/BioRock_ISS_Basalt_Biomining_Consortium.html b/docs/communities/BioRock_ISS_Basalt_Biomining_Consortium.html index 811df6786..22be19a8a 100644 --- a/docs/communities/BioRock_ISS_Basalt_Biomining_Consortium.html +++ b/docs/communities/BioRock_ISS_Basalt_Biomining_Consortium.html @@ -1217,14 +1217,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1237,9 +1235,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Brachypodium_Young_Root_Rhizosphere_EcoFAB_Community.html b/docs/communities/Brachypodium_Young_Root_Rhizosphere_EcoFAB_Community.html index 6c88a1833..7e15596c5 100644 --- a/docs/communities/Brachypodium_Young_Root_Rhizosphere_EcoFAB_Community.html +++ b/docs/communities/Brachypodium_Young_Root_Rhizosphere_EcoFAB_Community.html @@ -923,14 +923,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -943,9 +941,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Buchnera_Serratia_Cinara_Cedri_Endosymbiont_Consortium.html b/docs/communities/Buchnera_Serratia_Cinara_Cedri_Endosymbiont_Consortium.html index 52de088f1..18d50ec25 100644 --- a/docs/communities/Buchnera_Serratia_Cinara_Cedri_Endosymbiont_Consortium.html +++ b/docs/communities/Buchnera_Serratia_Cinara_Cedri_Endosymbiont_Consortium.html @@ -551,7 +551,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Environmental Factors (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -889,9 +887,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Butyrivibrio_Selenomonas_Ruminococcus_Lignocellulolytic_Rumen_Consortium.html b/docs/communities/Butyrivibrio_Selenomonas_Ruminococcus_Lignocellulolytic_Rumen_Consortium.html index f7186ac7f..f6b9e0b33 100644 --- a/docs/communities/Butyrivibrio_Selenomonas_Ruminococcus_Lignocellulolytic_Rumen_Consortium.html +++ b/docs/communities/Butyrivibrio_Selenomonas_Ruminococcus_Lignocellulolytic_Rumen_Consortium.html @@ -600,7 +600,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -711,14 +711,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -731,9 +729,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/CRC_Fusobacterium_Control_SynCom.html b/docs/communities/CRC_Fusobacterium_Control_SynCom.html index 5fddb0980..f3a8bdc88 100644 --- a/docs/communities/CRC_Fusobacterium_Control_SynCom.html +++ b/docs/communities/CRC_Fusobacterium_Control_SynCom.html @@ -679,14 +679,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -699,9 +697,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Cable_Bacteria_Photosynthetic_Biofilm_Sediment.html b/docs/communities/Cable_Bacteria_Photosynthetic_Biofilm_Sediment.html index 1e017ca7a..9e4d5c1db 100644 --- a/docs/communities/Cable_Bacteria_Photosynthetic_Biofilm_Sediment.html +++ b/docs/communities/Cable_Bacteria_Photosynthetic_Biofilm_Sediment.html @@ -1020,14 +1020,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1040,9 +1038,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Caldibacillus_Clostridium_Aerotolerant_Cellulose_Coculture.html b/docs/communities/Caldibacillus_Clostridium_Aerotolerant_Cellulose_Coculture.html index dc967c77f..e1ccfe564 100644 --- a/docs/communities/Caldibacillus_Clostridium_Aerotolerant_Cellulose_Coculture.html +++ b/docs/communities/Caldibacillus_Clostridium_Aerotolerant_Cellulose_Coculture.html @@ -1011,14 +1011,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1031,9 +1029,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Caldicellulosiruptor_TwoSpecies_Hydrogen_Coculture.html b/docs/communities/Caldicellulosiruptor_TwoSpecies_Hydrogen_Coculture.html index 877fb5823..1d4623cb0 100644 --- a/docs/communities/Caldicellulosiruptor_TwoSpecies_Hydrogen_Coculture.html +++ b/docs/communities/Caldicellulosiruptor_TwoSpecies_Hydrogen_Coculture.html @@ -551,7 +551,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1185,9 +1183,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/California_Grassland_Precipitation_Legacy_Soil_Community.html b/docs/communities/California_Grassland_Precipitation_Legacy_Soil_Community.html index a820774f6..170634a06 100644 --- a/docs/communities/California_Grassland_Precipitation_Legacy_Soil_Community.html +++ b/docs/communities/California_Grassland_Precipitation_Legacy_Soil_Community.html @@ -902,14 +902,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -922,9 +920,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Candida_Parapsilosis_Hospitalized_Infant_Microbiome.html b/docs/communities/Candida_Parapsilosis_Hospitalized_Infant_Microbiome.html index 9f3cc60a5..a24591c83 100644 --- a/docs/communities/Candida_Parapsilosis_Hospitalized_Infant_Microbiome.html +++ b/docs/communities/Candida_Parapsilosis_Hospitalized_Infant_Microbiome.html @@ -727,14 +727,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -747,9 +745,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/CeMbio_Caenorhabditis_Elegans_Microbiome.html b/docs/communities/CeMbio_Caenorhabditis_Elegans_Microbiome.html index 4b18476c3..ddf39379d 100644 --- a/docs/communities/CeMbio_Caenorhabditis_Elegans_Microbiome.html +++ b/docs/communities/CeMbio_Caenorhabditis_Elegans_Microbiome.html @@ -549,7 +549,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1170,9 +1168,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Cellulomonas_Rhodobacter_Cellulose_Photohydrogen_Coculture.html b/docs/communities/Cellulomonas_Rhodobacter_Cellulose_Photohydrogen_Coculture.html index cf8dd171b..296412fe1 100644 --- a/docs/communities/Cellulomonas_Rhodobacter_Cellulose_Photohydrogen_Coculture.html +++ b/docs/communities/Cellulomonas_Rhodobacter_Cellulose_Photohydrogen_Coculture.html @@ -1057,14 +1057,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1077,9 +1075,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Cellulose_Methane_Quad_Culture_SynCom.html b/docs/communities/Cellulose_Methane_Quad_Culture_SynCom.html index 9fa3fdfa9..9975f51b9 100644 --- a/docs/communities/Cellulose_Methane_Quad_Culture_SynCom.html +++ b/docs/communities/Cellulose_Methane_Quad_Culture_SynCom.html @@ -1248,14 +1248,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1268,9 +1266,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Cheese_Rind_InSitu_InVitro_Model_Community.html b/docs/communities/Cheese_Rind_InSitu_InVitro_Model_Community.html index 6997be0ba..f0f5f81a5 100644 --- a/docs/communities/Cheese_Rind_InSitu_InVitro_Model_Community.html +++ b/docs/communities/Cheese_Rind_InSitu_InVitro_Model_Community.html @@ -994,14 +994,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1014,9 +1012,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Chlamydomonas_Bacterial_H2_Consortium.html b/docs/communities/Chlamydomonas_Bacterial_H2_Consortium.html index 2d07325b2..f896eb1b0 100644 --- a/docs/communities/Chlamydomonas_Bacterial_H2_Consortium.html +++ b/docs/communities/Chlamydomonas_Bacterial_H2_Consortium.html @@ -626,7 +626,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1156,9 +1154,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Chlamydomonas_Methylobacterium_Mutualism.html b/docs/communities/Chlamydomonas_Methylobacterium_Mutualism.html index ea2a18e32..516e03757 100644 --- a/docs/communities/Chlamydomonas_Methylobacterium_Mutualism.html +++ b/docs/communities/Chlamydomonas_Methylobacterium_Mutualism.html @@ -542,7 +542,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1075,14 +1075,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1095,9 +1093,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Chlorella_Azospirillum_Synthetic_Mutualism.html b/docs/communities/Chlorella_Azospirillum_Synthetic_Mutualism.html index adf5295c9..a0d44ceb5 100644 --- a/docs/communities/Chlorella_Azospirillum_Synthetic_Mutualism.html +++ b/docs/communities/Chlorella_Azospirillum_Synthetic_Mutualism.html @@ -573,7 +573,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1369,9 +1367,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Chlorella_Ecoli_Mixotrophic_Biofuel_Coculture.html b/docs/communities/Chlorella_Ecoli_Mixotrophic_Biofuel_Coculture.html index d4a372c51..13ba75328 100644 --- a/docs/communities/Chlorella_Ecoli_Mixotrophic_Biofuel_Coculture.html +++ b/docs/communities/Chlorella_Ecoli_Mixotrophic_Biofuel_Coculture.html @@ -569,7 +569,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1122,9 +1120,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Chlorella_Keystone_Taxa_Antifungal_SynCom.html b/docs/communities/Chlorella_Keystone_Taxa_Antifungal_SynCom.html index 081ce5eb2..5268dacf5 100644 --- a/docs/communities/Chlorella_Keystone_Taxa_Antifungal_SynCom.html +++ b/docs/communities/Chlorella_Keystone_Taxa_Antifungal_SynCom.html @@ -1070,14 +1070,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1090,9 +1088,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Chlorella_Rhizobium_Bioflocculation.html b/docs/communities/Chlorella_Rhizobium_Bioflocculation.html index 7dfdc82ab..2717af9c0 100644 --- a/docs/communities/Chlorella_Rhizobium_Bioflocculation.html +++ b/docs/communities/Chlorella_Rhizobium_Bioflocculation.html @@ -542,7 +542,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -977,9 +975,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Chlorochromatium_Aggregatum_Phototrophic_Consortium.html b/docs/communities/Chlorochromatium_Aggregatum_Phototrophic_Consortium.html index 3edd7be55..03576d999 100644 --- a/docs/communities/Chlorochromatium_Aggregatum_Phototrophic_Consortium.html +++ b/docs/communities/Chlorochromatium_Aggregatum_Phototrophic_Consortium.html @@ -942,14 +942,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -962,9 +960,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Chromium_Sulfur_Reduction_Enrichment.html b/docs/communities/Chromium_Sulfur_Reduction_Enrichment.html index 4685be1ce..d7ef7c74d 100644 --- a/docs/communities/Chromium_Sulfur_Reduction_Enrichment.html +++ b/docs/communities/Chromium_Sulfur_Reduction_Enrichment.html @@ -638,7 +638,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1387,9 +1385,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Cinnamate_Degradation_Consortium.html b/docs/communities/Cinnamate_Degradation_Consortium.html index ede7cc70a..4006fb855 100644 --- a/docs/communities/Cinnamate_Degradation_Consortium.html +++ b/docs/communities/Cinnamate_Degradation_Consortium.html @@ -943,14 +943,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -963,9 +961,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Autoethanogenum_Kluyveri_Syngas_Coculture.html b/docs/communities/Clostridium_Autoethanogenum_Kluyveri_Syngas_Coculture.html index fae0237a8..888ae5e3c 100644 --- a/docs/communities/Clostridium_Autoethanogenum_Kluyveri_Syngas_Coculture.html +++ b/docs/communities/Clostridium_Autoethanogenum_Kluyveri_Syngas_Coculture.html @@ -1187,14 +1187,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1207,9 +1205,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Caldicellulosiruptor_Minimal_Medium_Coculture.html b/docs/communities/Clostridium_Caldicellulosiruptor_Minimal_Medium_Coculture.html index 8b9d455c9..6426fe318 100644 --- a/docs/communities/Clostridium_Caldicellulosiruptor_Minimal_Medium_Coculture.html +++ b/docs/communities/Clostridium_Caldicellulosiruptor_Minimal_Medium_Coculture.html @@ -1176,14 +1176,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1196,9 +1194,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Carboxidivorans_Kluyveri_CO_Chain_Elongation_Coculture.html b/docs/communities/Clostridium_Carboxidivorans_Kluyveri_CO_Chain_Elongation_Coculture.html index c6371ad86..93fc3e852 100644 --- a/docs/communities/Clostridium_Carboxidivorans_Kluyveri_CO_Chain_Elongation_Coculture.html +++ b/docs/communities/Clostridium_Carboxidivorans_Kluyveri_CO_Chain_Elongation_Coculture.html @@ -1166,14 +1166,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1186,9 +1184,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Cellulolyticum_Geobacter_Cellulose_MFC_Coculture.html b/docs/communities/Clostridium_Cellulolyticum_Geobacter_Cellulose_MFC_Coculture.html index 8bcea94c0..a533c3499 100644 --- a/docs/communities/Clostridium_Cellulolyticum_Geobacter_Cellulose_MFC_Coculture.html +++ b/docs/communities/Clostridium_Cellulolyticum_Geobacter_Cellulose_MFC_Coculture.html @@ -568,7 +568,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1161,9 +1159,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Cellulovorans_Methanosarcina_Cellulose_Methane_Coculture.html b/docs/communities/Clostridium_Cellulovorans_Methanosarcina_Cellulose_Methane_Coculture.html index 08d7413ad..7f13081ff 100644 --- a/docs/communities/Clostridium_Cellulovorans_Methanosarcina_Cellulose_Methane_Coculture.html +++ b/docs/communities/Clostridium_Cellulovorans_Methanosarcina_Cellulose_Methane_Coculture.html @@ -573,7 +573,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1161,9 +1159,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Cellulovorans_Rhodopseudomonas_Cellulose_Biohydrogen_Coculture.html b/docs/communities/Clostridium_Cellulovorans_Rhodopseudomonas_Cellulose_Biohydrogen_Coculture.html index 0949973a4..0ce212e30 100644 --- a/docs/communities/Clostridium_Cellulovorans_Rhodopseudomonas_Cellulose_Biohydrogen_Coculture.html +++ b/docs/communities/Clostridium_Cellulovorans_Rhodopseudomonas_Cellulose_Biohydrogen_Coculture.html @@ -1053,14 +1053,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1073,9 +1071,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Ljungdahlii_Kluyveri_Syngas_Alcohol_Coculture.html b/docs/communities/Clostridium_Ljungdahlii_Kluyveri_Syngas_Alcohol_Coculture.html index cd84a7465..ab131c418 100644 --- a/docs/communities/Clostridium_Ljungdahlii_Kluyveri_Syngas_Alcohol_Coculture.html +++ b/docs/communities/Clostridium_Ljungdahlii_Kluyveri_Syngas_Alcohol_Coculture.html @@ -1229,14 +1229,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1249,9 +1247,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Phytofermentans_Ecoli_Cellobiose_Biofilm_Consortium.html b/docs/communities/Clostridium_Phytofermentans_Ecoli_Cellobiose_Biofilm_Consortium.html index 158783fb2..7422f6f0e 100644 --- a/docs/communities/Clostridium_Phytofermentans_Ecoli_Cellobiose_Biofilm_Consortium.html +++ b/docs/communities/Clostridium_Phytofermentans_Ecoli_Cellobiose_Biofilm_Consortium.html @@ -1245,14 +1245,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1265,9 +1263,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Saccharomyces_Cellulose_Ethanol_Coculture.html b/docs/communities/Clostridium_Saccharomyces_Cellulose_Ethanol_Coculture.html index 2cdfc98e9..d4073d9c6 100644 --- a/docs/communities/Clostridium_Saccharomyces_Cellulose_Ethanol_Coculture.html +++ b/docs/communities/Clostridium_Saccharomyces_Cellulose_Ethanol_Coculture.html @@ -573,7 +573,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1157,14 +1157,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1177,9 +1175,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Thermoanaerobacter_Cellulosic_Bioethanol_Coculture.html b/docs/communities/Clostridium_Thermoanaerobacter_Cellulosic_Bioethanol_Coculture.html index 37d3a60b2..0de58aae8 100644 --- a/docs/communities/Clostridium_Thermoanaerobacter_Cellulosic_Bioethanol_Coculture.html +++ b/docs/communities/Clostridium_Thermoanaerobacter_Cellulosic_Bioethanol_Coculture.html @@ -1113,14 +1113,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1133,9 +1131,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Thermoanaerobacterium_JN4_GD17_Cellulosic_Biofuel_Coculture.html b/docs/communities/Clostridium_Thermoanaerobacterium_JN4_GD17_Cellulosic_Biofuel_Coculture.html index 98fb5f7bc..082b4b370 100644 --- a/docs/communities/Clostridium_Thermoanaerobacterium_JN4_GD17_Cellulosic_Biofuel_Coculture.html +++ b/docs/communities/Clostridium_Thermoanaerobacterium_JN4_GD17_Cellulosic_Biofuel_Coculture.html @@ -1106,14 +1106,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1126,9 +1124,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Clostridium_Thermocellum_Saccharoperbutylacetonicum_Cellulosic_Butanol_Coculture.html b/docs/communities/Clostridium_Thermocellum_Saccharoperbutylacetonicum_Cellulosic_Butanol_Coculture.html index fc7820fe9..d5237fabe 100644 --- a/docs/communities/Clostridium_Thermocellum_Saccharoperbutylacetonicum_Cellulosic_Butanol_Coculture.html +++ b/docs/communities/Clostridium_Thermocellum_Saccharoperbutylacetonicum_Cellulosic_Butanol_Coculture.html @@ -1228,14 +1228,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1248,9 +1246,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Coastal_Forested_Wetland_Seawater_Ion_Microcosm_Community.html b/docs/communities/Coastal_Forested_Wetland_Seawater_Ion_Microcosm_Community.html index 9d53dc190..9821d4aca 100644 --- a/docs/communities/Coastal_Forested_Wetland_Seawater_Ion_Microcosm_Community.html +++ b/docs/communities/Coastal_Forested_Wetland_Seawater_Ion_Microcosm_Community.html @@ -1158,14 +1158,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1178,9 +1176,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Composting_SynCom_Lignocellulose_Degradation_Humus.html b/docs/communities/Composting_SynCom_Lignocellulose_Degradation_Humus.html index 47b938c75..0eee995f9 100644 --- a/docs/communities/Composting_SynCom_Lignocellulose_Degradation_Humus.html +++ b/docs/communities/Composting_SynCom_Lignocellulose_Degradation_Humus.html @@ -661,14 +661,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -681,9 +679,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Coniochaeta_Sphingobacterium_Citrobacter_Wheat_Straw_Consortium.html b/docs/communities/Coniochaeta_Sphingobacterium_Citrobacter_Wheat_Straw_Consortium.html index 3e795032a..cad014a9e 100644 --- a/docs/communities/Coniochaeta_Sphingobacterium_Citrobacter_Wheat_Straw_Consortium.html +++ b/docs/communities/Coniochaeta_Sphingobacterium_Citrobacter_Wheat_Straw_Consortium.html @@ -1347,14 +1347,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1367,9 +1365,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Copper_Biomining_Heap_Leach.html b/docs/communities/Copper_Biomining_Heap_Leach.html index 20ccb0b27..424acb82e 100644 --- a/docs/communities/Copper_Biomining_Heap_Leach.html +++ b/docs/communities/Copper_Biomining_Heap_Leach.html @@ -723,7 +723,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1592,9 +1590,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Corynebacterium_glutamicum_Shewanella_oneidensis_Succinic_Acid_Coculture.html b/docs/communities/Corynebacterium_glutamicum_Shewanella_oneidensis_Succinic_Acid_Coculture.html index dd10e608f..98ceeb7a6 100644 --- a/docs/communities/Corynebacterium_glutamicum_Shewanella_oneidensis_Succinic_Acid_Coculture.html +++ b/docs/communities/Corynebacterium_glutamicum_Shewanella_oneidensis_Succinic_Acid_Coculture.html @@ -706,14 +706,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -726,9 +724,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Coscinodiscus_Synthetic_Community.html b/docs/communities/Coscinodiscus_Synthetic_Community.html index 2fa672a1f..4d7ee6dd3 100644 --- a/docs/communities/Coscinodiscus_Synthetic_Community.html +++ b/docs/communities/Coscinodiscus_Synthetic_Community.html @@ -668,7 +668,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1472,9 +1470,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Crucian_Carp_Gut_Disease_Resistance_SynCom.html b/docs/communities/Crucian_Carp_Gut_Disease_Resistance_SynCom.html index f9d8e95fb..3a31ff56e 100644 --- a/docs/communities/Crucian_Carp_Gut_Disease_Resistance_SynCom.html +++ b/docs/communities/Crucian_Carp_Gut_Disease_Resistance_SynCom.html @@ -705,14 +705,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -725,9 +723,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Crystal_Geyser_CO2_Aquifer_CPR_Lipid_Community.html b/docs/communities/Crystal_Geyser_CO2_Aquifer_CPR_Lipid_Community.html index 29e08b7c3..2dfd6d2d8 100644 --- a/docs/communities/Crystal_Geyser_CO2_Aquifer_CPR_Lipid_Community.html +++ b/docs/communities/Crystal_Geyser_CO2_Aquifer_CPR_Lipid_Community.html @@ -867,14 +867,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -887,9 +885,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Cyprus_Copper_Sulphide_Bioleaching_Consortium.html b/docs/communities/Cyprus_Copper_Sulphide_Bioleaching_Consortium.html index f42a2c584..1111cd49d 100644 --- a/docs/communities/Cyprus_Copper_Sulphide_Bioleaching_Consortium.html +++ b/docs/communities/Cyprus_Copper_Sulphide_Bioleaching_Consortium.html @@ -918,14 +918,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -938,9 +936,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/DIETsimp_Lignocellulose_to_Methane_DIET_Consortia.html b/docs/communities/DIETsimp_Lignocellulose_to_Methane_DIET_Consortia.html index a29494823..6b7dd4ede 100644 --- a/docs/communities/DIETsimp_Lignocellulose_to_Methane_DIET_Consortia.html +++ b/docs/communities/DIETsimp_Lignocellulose_to_Methane_DIET_Consortia.html @@ -892,14 +892,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -912,9 +910,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/DVM_Triculture.html b/docs/communities/DVM_Triculture.html index 41b762f96..9f2d4ceb9 100644 --- a/docs/communities/DVM_Triculture.html +++ b/docs/communities/DVM_Triculture.html @@ -1171,14 +1171,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1191,9 +1189,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Dangl_SynComm_35.html b/docs/communities/Dangl_SynComm_35.html index 4360aa1dd..83c7ac096 100644 --- a/docs/communities/Dangl_SynComm_35.html +++ b/docs/communities/Dangl_SynComm_35.html @@ -761,7 +761,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1620,9 +1618,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Deepwater_Horizon_Deep_Sea_Oil_Plume_Succession.html b/docs/communities/Deepwater_Horizon_Deep_Sea_Oil_Plume_Succession.html index b59943bbc..1f20a41d0 100644 --- a/docs/communities/Deepwater_Horizon_Deep_Sea_Oil_Plume_Succession.html +++ b/docs/communities/Deepwater_Horizon_Deep_Sea_Oil_Plume_Succession.html @@ -1303,14 +1303,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1323,9 +1321,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Dehalococcoides_Desulfovibrio_Lactate_TCE_Syntrophy.html b/docs/communities/Dehalococcoides_Desulfovibrio_Lactate_TCE_Syntrophy.html index 0bdc8c797..5f86aacc0 100644 --- a/docs/communities/Dehalococcoides_Desulfovibrio_Lactate_TCE_Syntrophy.html +++ b/docs/communities/Dehalococcoides_Desulfovibrio_Lactate_TCE_Syntrophy.html @@ -1312,14 +1312,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1332,9 +1330,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Dehalococcoides_Desulfovibrio_Pelosinus_Corrinoid_Triculture.html b/docs/communities/Dehalococcoides_Desulfovibrio_Pelosinus_Corrinoid_Triculture.html index 46ba68d96..39756ad06 100644 --- a/docs/communities/Dehalococcoides_Desulfovibrio_Pelosinus_Corrinoid_Triculture.html +++ b/docs/communities/Dehalococcoides_Desulfovibrio_Pelosinus_Corrinoid_Triculture.html @@ -1255,14 +1255,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1275,9 +1273,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Dehalococcoides_Methanosarcina_DMB_Cobalamin_Coculture.html b/docs/communities/Dehalococcoides_Methanosarcina_DMB_Cobalamin_Coculture.html index 0e7d2180d..c93735ef5 100644 --- a/docs/communities/Dehalococcoides_Methanosarcina_DMB_Cobalamin_Coculture.html +++ b/docs/communities/Dehalococcoides_Methanosarcina_DMB_Cobalamin_Coculture.html @@ -1180,14 +1180,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1200,9 +1198,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Dehalococcoides_Pelobacter_Acetylene_TCE_Coculture.html b/docs/communities/Dehalococcoides_Pelobacter_Acetylene_TCE_Coculture.html index a3ce57895..d59aa0825 100644 --- a/docs/communities/Dehalococcoides_Pelobacter_Acetylene_TCE_Coculture.html +++ b/docs/communities/Dehalococcoides_Pelobacter_Acetylene_TCE_Coculture.html @@ -1155,14 +1155,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1175,9 +1173,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Dehalococcoides_Syntrophomonas_TCE_Dechlorination_Coculture.html b/docs/communities/Dehalococcoides_Syntrophomonas_TCE_Dechlorination_Coculture.html index c83b92358..420dc22c5 100644 --- a/docs/communities/Dehalococcoides_Syntrophomonas_TCE_Dechlorination_Coculture.html +++ b/docs/communities/Dehalococcoides_Syntrophomonas_TCE_Dechlorination_Coculture.html @@ -1225,14 +1225,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1245,9 +1243,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Dehalococcoides_mccartyi_CWV2_Dechlorinating_Consortium.html b/docs/communities/Dehalococcoides_mccartyi_CWV2_Dechlorinating_Consortium.html index 2dfc157a0..2199baeae 100644 --- a/docs/communities/Dehalococcoides_mccartyi_CWV2_Dechlorinating_Consortium.html +++ b/docs/communities/Dehalococcoides_mccartyi_CWV2_Dechlorinating_Consortium.html @@ -631,14 +631,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -651,9 +649,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Desert_Tomato_Salt_Stress_SynCom5.html b/docs/communities/Desert_Tomato_Salt_Stress_SynCom5.html index 9589dc271..c1a31be31 100644 --- a/docs/communities/Desert_Tomato_Salt_Stress_SynCom5.html +++ b/docs/communities/Desert_Tomato_Salt_Stress_SynCom5.html @@ -499,7 +499,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -666,14 +666,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -686,9 +684,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Desulfovibrio_Methanococcus_Syntrophy.html b/docs/communities/Desulfovibrio_Methanococcus_Syntrophy.html index 1f84ebdfc..ba4c39799 100644 --- a/docs/communities/Desulfovibrio_Methanococcus_Syntrophy.html +++ b/docs/communities/Desulfovibrio_Methanococcus_Syntrophy.html @@ -1270,14 +1270,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1290,9 +1288,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Desulfovibrio_Methanosarcina_Lactate_Syntrophy.html b/docs/communities/Desulfovibrio_Methanosarcina_Lactate_Syntrophy.html index 2e097a5c8..e042cef96 100644 --- a/docs/communities/Desulfovibrio_Methanosarcina_Lactate_Syntrophy.html +++ b/docs/communities/Desulfovibrio_Methanosarcina_Lactate_Syntrophy.html @@ -938,14 +938,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -958,9 +956,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Drosophila_FiveSpecies_Gnotobiotic_Gut_Microbiota.html b/docs/communities/Drosophila_FiveSpecies_Gnotobiotic_Gut_Microbiota.html index cff705c88..e6c9f4ead 100644 --- a/docs/communities/Drosophila_FiveSpecies_Gnotobiotic_Gut_Microbiota.html +++ b/docs/communities/Drosophila_FiveSpecies_Gnotobiotic_Gut_Microbiota.html @@ -609,7 +609,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1047,9 +1045,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Drought_Rhizosphere_Iron_Actinobacteria_Community.html b/docs/communities/Drought_Rhizosphere_Iron_Actinobacteria_Community.html index 2112aedbb..78b1eacc4 100644 --- a/docs/communities/Drought_Rhizosphere_Iron_Actinobacteria_Community.html +++ b/docs/communities/Drought_Rhizosphere_Iron_Actinobacteria_Community.html @@ -863,14 +863,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -883,9 +881,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Dual_Bacillus_coagulans_Pseudomonas_putida_Lactic_Acid_Coculture.html b/docs/communities/Dual_Bacillus_coagulans_Pseudomonas_putida_Lactic_Acid_Coculture.html index a43de44e9..fd4363e9f 100644 --- a/docs/communities/Dual_Bacillus_coagulans_Pseudomonas_putida_Lactic_Acid_Coculture.html +++ b/docs/communities/Dual_Bacillus_coagulans_Pseudomonas_putida_Lactic_Acid_Coculture.html @@ -856,14 +856,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -876,9 +874,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/ENIGMA_Denitrifying_SynCom.html b/docs/communities/ENIGMA_Denitrifying_SynCom.html index 180936def..38c1e5ca8 100644 --- a/docs/communities/ENIGMA_Denitrifying_SynCom.html +++ b/docs/communities/ENIGMA_Denitrifying_SynCom.html @@ -971,14 +971,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -991,9 +989,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/East_River_Floodplain_Core_Microbiome.html b/docs/communities/East_River_Floodplain_Core_Microbiome.html index 5cd7220e6..904ccb4bc 100644 --- a/docs/communities/East_River_Floodplain_Core_Microbiome.html +++ b/docs/communities/East_River_Floodplain_Core_Microbiome.html @@ -933,14 +933,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -953,9 +951,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/East_River_Hillslope_Riparian_Transect_Community.html b/docs/communities/East_River_Hillslope_Riparian_Transect_Community.html index e2cb0cbfc..4ad00cdb6 100644 --- a/docs/communities/East_River_Hillslope_Riparian_Transect_Community.html +++ b/docs/communities/East_River_Hillslope_Riparian_Transect_Community.html @@ -1164,14 +1164,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1184,9 +1182,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/EcoFAB_Ring_Trial_SynCom17.html b/docs/communities/EcoFAB_Ring_Trial_SynCom17.html index e289361cc..0d8a74264 100644 --- a/docs/communities/EcoFAB_Ring_Trial_SynCom17.html +++ b/docs/communities/EcoFAB_Ring_Trial_SynCom17.html @@ -2139,14 +2139,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -2159,9 +2157,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Ecoli_Bifidobacterium_bifidum_Infant_gut_HMO_Mutualism_Coculture.html b/docs/communities/Ecoli_Bifidobacterium_bifidum_Infant_gut_HMO_Mutualism_Coculture.html index 25b779177..991885c54 100644 --- a/docs/communities/Ecoli_Bifidobacterium_bifidum_Infant_gut_HMO_Mutualism_Coculture.html +++ b/docs/communities/Ecoli_Bifidobacterium_bifidum_Infant_gut_HMO_Mutualism_Coculture.html @@ -771,14 +771,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -791,9 +789,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Electrostimulated_Mixotrophic_VFA_Producing_Enrichment_Consortium.html b/docs/communities/Electrostimulated_Mixotrophic_VFA_Producing_Enrichment_Consortium.html index 0078b855e..24bcef190 100644 --- a/docs/communities/Electrostimulated_Mixotrophic_VFA_Producing_Enrichment_Consortium.html +++ b/docs/communities/Electrostimulated_Mixotrophic_VFA_Producing_Enrichment_Consortium.html @@ -684,14 +684,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -704,9 +702,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Electrosynthetic_Consortia_Shewanella_Clostridium_Acetobacterium_Acetate.html b/docs/communities/Electrosynthetic_Consortia_Shewanella_Clostridium_Acetobacterium_Acetate.html index ed1872939..988486ae8 100644 --- a/docs/communities/Electrosynthetic_Consortia_Shewanella_Clostridium_Acetobacterium_Acetate.html +++ b/docs/communities/Electrosynthetic_Consortia_Shewanella_Clostridium_Acetobacterium_Acetate.html @@ -801,14 +801,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -821,9 +819,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Emiliania_Phaeobacter_Dynamic_Interaction.html b/docs/communities/Emiliania_Phaeobacter_Dynamic_Interaction.html index 2de1c1540..53e715177 100644 --- a/docs/communities/Emiliania_Phaeobacter_Dynamic_Interaction.html +++ b/docs/communities/Emiliania_Phaeobacter_Dynamic_Interaction.html @@ -537,7 +537,7 @@

Ecological Interactions

Ecological interaction network for Emiliania huxleyi-Phaeobacter inhibens Dynamic Interaction - Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (cross-feeding, mutualism, predation). + Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (cross-feeding, mutualism).
@@ -551,12 +551,12 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Predation + aria-hidden="true" data-symbol="symbolTriangle2" + data-color="#929caa"> Other
@@ -915,14 +915,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -935,9 +933,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Engineered_Gut_Amino_Acid_CrossFeeding_Consortium.html b/docs/communities/Engineered_Gut_Amino_Acid_CrossFeeding_Consortium.html index c4405bc46..3a2e7cd76 100644 --- a/docs/communities/Engineered_Gut_Amino_Acid_CrossFeeding_Consortium.html +++ b/docs/communities/Engineered_Gut_Amino_Acid_CrossFeeding_Consortium.html @@ -635,7 +635,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1010,14 +1010,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1030,9 +1028,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Ensifer_YF2_Sphingobacterium_Y2_Polyethylene_Degrading_Consortium.html b/docs/communities/Ensifer_YF2_Sphingobacterium_Y2_Polyethylene_Degrading_Consortium.html index c6e531700..605312980 100644 --- a/docs/communities/Ensifer_YF2_Sphingobacterium_Y2_Polyethylene_Degrading_Consortium.html +++ b/docs/communities/Ensifer_YF2_Sphingobacterium_Y2_Polyethylene_Degrading_Consortium.html @@ -584,7 +584,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -749,14 +749,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -769,9 +767,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Episymbiotic_CPR_DPANN_Groundwater_Community.html b/docs/communities/Episymbiotic_CPR_DPANN_Groundwater_Community.html index 9bb759471..49b52d76c 100644 --- a/docs/communities/Episymbiotic_CPR_DPANN_Groundwater_Community.html +++ b/docs/communities/Episymbiotic_CPR_DPANN_Groundwater_Community.html @@ -833,14 +833,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -853,9 +851,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Eucalyptus_Nursery_FiveStrain_Inoculant_SynCom.html b/docs/communities/Eucalyptus_Nursery_FiveStrain_Inoculant_SynCom.html index 85b5c3ea5..aa6a0666a 100644 --- a/docs/communities/Eucalyptus_Nursery_FiveStrain_Inoculant_SynCom.html +++ b/docs/communities/Eucalyptus_Nursery_FiveStrain_Inoculant_SynCom.html @@ -674,7 +674,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -982,14 +982,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1002,9 +1000,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Ewaste_Bioleaching_Consortium.html b/docs/communities/Ewaste_Bioleaching_Consortium.html index fe08d1362..0a9c3821b 100644 --- a/docs/communities/Ewaste_Bioleaching_Consortium.html +++ b/docs/communities/Ewaste_Bioleaching_Consortium.html @@ -712,7 +712,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1409,9 +1407,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Ferroplasma_Leptospirillum_Syntrophy.html b/docs/communities/Ferroplasma_Leptospirillum_Syntrophy.html index ac35c7ecb..c0f25b1a3 100644 --- a/docs/communities/Ferroplasma_Leptospirillum_Syntrophy.html +++ b/docs/communities/Ferroplasma_Leptospirillum_Syntrophy.html @@ -570,7 +570,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1438,9 +1436,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/GLBRC_Exometabolite_Transwell_SynCom.html b/docs/communities/GLBRC_Exometabolite_Transwell_SynCom.html index e10b3249a..93a629e06 100644 --- a/docs/communities/GLBRC_Exometabolite_Transwell_SynCom.html +++ b/docs/communities/GLBRC_Exometabolite_Transwell_SynCom.html @@ -679,14 +679,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -699,9 +697,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/GLBRC_Populus_Variovorax_SynCom28.html b/docs/communities/GLBRC_Populus_Variovorax_SynCom28.html index d8124745a..ab0843257 100644 --- a/docs/communities/GLBRC_Populus_Variovorax_SynCom28.html +++ b/docs/communities/GLBRC_Populus_Variovorax_SynCom28.html @@ -1624,7 +1624,7 @@

Ecological Interactions

Ecological interaction network for GLBRC Populus Variovorax SynCom28 - Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (niche partitioning, colonization facilitation, strain competition). + Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (niche partitioning, colonization facilitation).
@@ -1642,8 +1642,8 @@

Ecological Interactions

Strain competition + aria-hidden="true" data-symbol="symbolTriangle2" + data-color="#929caa"> Other
@@ -2113,14 +2113,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -2133,9 +2131,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/GLBRC_UFMP_Fermentation_Community.html b/docs/communities/GLBRC_UFMP_Fermentation_Community.html index eb3e4a05c..70b4d7479 100644 --- a/docs/communities/GLBRC_UFMP_Fermentation_Community.html +++ b/docs/communities/GLBRC_UFMP_Fermentation_Community.html @@ -1269,14 +1269,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1289,9 +1287,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/GOM_Oil_Degrading_Consortium.html b/docs/communities/GOM_Oil_Degrading_Consortium.html index 3497ed99f..66941fa7f 100644 --- a/docs/communities/GOM_Oil_Degrading_Consortium.html +++ b/docs/communities/GOM_Oil_Degrading_Consortium.html @@ -897,14 +897,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -917,9 +915,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Garlic_Pseudomonas_SynCom6.html b/docs/communities/Garlic_Pseudomonas_SynCom6.html index 792d6e861..0dddcf2e1 100644 --- a/docs/communities/Garlic_Pseudomonas_SynCom6.html +++ b/docs/communities/Garlic_Pseudomonas_SynCom6.html @@ -499,7 +499,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -666,14 +666,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -686,9 +684,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Geobacter_Clostridium_Interspecies_Electron_Transfer_Coculture.html b/docs/communities/Geobacter_Clostridium_Interspecies_Electron_Transfer_Coculture.html index 11d2562cc..ec2445f1b 100644 --- a/docs/communities/Geobacter_Clostridium_Interspecies_Electron_Transfer_Coculture.html +++ b/docs/communities/Geobacter_Clostridium_Interspecies_Electron_Transfer_Coculture.html @@ -567,7 +567,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1282,9 +1280,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Geobacter_Methanosaeta_DIET.html b/docs/communities/Geobacter_Methanosaeta_DIET.html index fa6665b5a..aec4f9931 100644 --- a/docs/communities/Geobacter_Methanosaeta_DIET.html +++ b/docs/communities/Geobacter_Methanosaeta_DIET.html @@ -544,7 +544,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1007,9 +1005,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Geobacter_Methanosarcina_DIET.html b/docs/communities/Geobacter_Methanosarcina_DIET.html index 43cb5fa65..2dc0d82ce 100644 --- a/docs/communities/Geobacter_Methanosarcina_DIET.html +++ b/docs/communities/Geobacter_Methanosarcina_DIET.html @@ -544,7 +544,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1183,9 +1181,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Geobacter_Pseudomonas_Formate_Fumarate_Electroactive_Coculture.html b/docs/communities/Geobacter_Pseudomonas_Formate_Fumarate_Electroactive_Coculture.html index a39888a3c..481e89767 100644 --- a/docs/communities/Geobacter_Pseudomonas_Formate_Fumarate_Electroactive_Coculture.html +++ b/docs/communities/Geobacter_Pseudomonas_Formate_Fumarate_Electroactive_Coculture.html @@ -1143,14 +1143,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1163,9 +1161,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Grassland_Soil_WetUp_Virus_Host_Community.html b/docs/communities/Grassland_Soil_WetUp_Virus_Host_Community.html index c65949ecc..a4b1bad32 100644 --- a/docs/communities/Grassland_Soil_WetUp_Virus_Host_Community.html +++ b/docs/communities/Grassland_Soil_WetUp_Virus_Host_Community.html @@ -527,7 +527,7 @@

Ecological Interactions

Ecological interaction network for Grassland Soil Wet-Up Virus-Host Community - Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (predation). + Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction.
@@ -535,8 +535,8 @@

Ecological Interactions

Predation + aria-hidden="true" data-symbol="symbolTriangle2" + data-color="#929caa"> Other
@@ -827,14 +827,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -847,9 +845,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Groundwater_Elusimicrobia_Diverse_Metabolisms.html b/docs/communities/Groundwater_Elusimicrobia_Diverse_Metabolisms.html index c33f653c8..737c281d9 100644 --- a/docs/communities/Groundwater_Elusimicrobia_Diverse_Metabolisms.html +++ b/docs/communities/Groundwater_Elusimicrobia_Diverse_Metabolisms.html @@ -860,14 +860,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -880,9 +878,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Hanford_300_Area_Unconfined_Aquifer_Community.html b/docs/communities/Hanford_300_Area_Unconfined_Aquifer_Community.html index 215fc17ac..76949c557 100644 --- a/docs/communities/Hanford_300_Area_Unconfined_Aquifer_Community.html +++ b/docs/communities/Hanford_300_Area_Unconfined_Aquifer_Community.html @@ -893,14 +893,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -913,9 +911,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/High_Solids_Switchgrass_Methanogenic_Microbiome.html b/docs/communities/High_Solids_Switchgrass_Methanogenic_Microbiome.html index 304289133..d32cc5818 100644 --- a/docs/communities/High_Solids_Switchgrass_Methanogenic_Microbiome.html +++ b/docs/communities/High_Solids_Switchgrass_Methanogenic_Microbiome.html @@ -1350,14 +1350,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1370,9 +1368,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Honeybee_Core20_Defined_Microbiota.html b/docs/communities/Honeybee_Core20_Defined_Microbiota.html index cfd7316a2..692dd79b3 100644 --- a/docs/communities/Honeybee_Core20_Defined_Microbiota.html +++ b/docs/communities/Honeybee_Core20_Defined_Microbiota.html @@ -671,14 +671,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -691,9 +689,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Horonobe_Mizunami_URL_Subsurface_Microbiome.html b/docs/communities/Horonobe_Mizunami_URL_Subsurface_Microbiome.html index d4313a558..e2da53082 100644 --- a/docs/communities/Horonobe_Mizunami_URL_Subsurface_Microbiome.html +++ b/docs/communities/Horonobe_Mizunami_URL_Subsurface_Microbiome.html @@ -942,14 +942,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -962,9 +960,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Human_Gut_FourMember_Proteome_Complementarity_Consortium.html b/docs/communities/Human_Gut_FourMember_Proteome_Complementarity_Consortium.html index 9045bd7a7..94df6ff25 100644 --- a/docs/communities/Human_Gut_FourMember_Proteome_Complementarity_Consortium.html +++ b/docs/communities/Human_Gut_FourMember_Proteome_Complementarity_Consortium.html @@ -973,14 +973,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -993,9 +991,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Iberian_Pit_Lake_Stratified_Community.html b/docs/communities/Iberian_Pit_Lake_Stratified_Community.html index e40501024..0b0a34749 100644 --- a/docs/communities/Iberian_Pit_Lake_Stratified_Community.html +++ b/docs/communities/Iberian_Pit_Lake_Stratified_Community.html @@ -884,7 +884,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1553,14 +1553,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1573,9 +1571,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Industrial_Bioreactor_Consortium.html b/docs/communities/Industrial_Bioreactor_Consortium.html index ad3261e5e..dc580f50e 100644 --- a/docs/communities/Industrial_Bioreactor_Consortium.html +++ b/docs/communities/Industrial_Bioreactor_Consortium.html @@ -877,7 +877,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1902,9 +1900,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Industrial_Milk_Line_FourSpecies_Model_Biofilm.html b/docs/communities/Industrial_Milk_Line_FourSpecies_Model_Biofilm.html index 859320939..bfc298a4b 100644 --- a/docs/communities/Industrial_Milk_Line_FourSpecies_Model_Biofilm.html +++ b/docs/communities/Industrial_Milk_Line_FourSpecies_Model_Biofilm.html @@ -1077,14 +1077,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1097,9 +1095,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Infant_Gut_DNA_Phage_Succession_Community.html b/docs/communities/Infant_Gut_DNA_Phage_Succession_Community.html index 8c07b94ff..d13852aba 100644 --- a/docs/communities/Infant_Gut_DNA_Phage_Succession_Community.html +++ b/docs/communities/Infant_Gut_DNA_Phage_Succession_Community.html @@ -521,7 +521,7 @@

Ecological Interactions

Ecological interaction network for Infant Gut DNA Phageome Succession Community - Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (colonization facilitation, predation). + Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (colonization facilitation).
@@ -534,8 +534,8 @@

Ecological Interactions

Predation + aria-hidden="true" data-symbol="symbolTriangle2" + data-color="#929caa"> Other
@@ -842,14 +842,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -862,9 +860,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Infant_Gut_Prebiotic_Response_SynCom.html b/docs/communities/Infant_Gut_Prebiotic_Response_SynCom.html index f86909778..18121a40f 100644 --- a/docs/communities/Infant_Gut_Prebiotic_Response_SynCom.html +++ b/docs/communities/Infant_Gut_Prebiotic_Response_SynCom.html @@ -888,14 +888,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -908,9 +906,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Infant_Gut_Strain_Persistence_Maternal_Community.html b/docs/communities/Infant_Gut_Strain_Persistence_Maternal_Community.html index bb140cf54..64f0e8625 100644 --- a/docs/communities/Infant_Gut_Strain_Persistence_Maternal_Community.html +++ b/docs/communities/Infant_Gut_Strain_Persistence_Maternal_Community.html @@ -924,14 +924,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -944,9 +942,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Ion_Adsorption_REE_Indigenous_Community.html b/docs/communities/Ion_Adsorption_REE_Indigenous_Community.html index 1839968af..444b0f453 100644 --- a/docs/communities/Ion_Adsorption_REE_Indigenous_Community.html +++ b/docs/communities/Ion_Adsorption_REE_Indigenous_Community.html @@ -827,7 +827,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1502,9 +1500,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Jala_Maize_PGPB_SynCom.html b/docs/communities/Jala_Maize_PGPB_SynCom.html index bd7bca122..417c50c1a 100644 --- a/docs/communities/Jala_Maize_PGPB_SynCom.html +++ b/docs/communities/Jala_Maize_PGPB_SynCom.html @@ -625,7 +625,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -805,14 +805,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -825,9 +823,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/KB1_Chlorinated_Ethene_Dechlorinating_Consortium.html b/docs/communities/KB1_Chlorinated_Ethene_Dechlorinating_Consortium.html index 0c2ffdd99..d35ae8749 100644 --- a/docs/communities/KB1_Chlorinated_Ethene_Dechlorinating_Consortium.html +++ b/docs/communities/KB1_Chlorinated_Ethene_Dechlorinating_Consortium.html @@ -925,14 +925,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -945,9 +943,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/KBase_Models_for_Zahmeeth_Original_PLOS.html b/docs/communities/KBase_Models_for_Zahmeeth_Original_PLOS.html index 8c601619d..299665d35 100644 --- a/docs/communities/KBase_Models_for_Zahmeeth_Original_PLOS.html +++ b/docs/communities/KBase_Models_for_Zahmeeth_Original_PLOS.html @@ -833,14 +833,12 @@

External Resources

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -853,9 +851,7 @@

External Resources

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/KBase_ORT_Workflow_Community_Model.html b/docs/communities/KBase_ORT_Workflow_Community_Model.html index 7f71b95c2..fd006d7d5 100644 --- a/docs/communities/KBase_ORT_Workflow_Community_Model.html +++ b/docs/communities/KBase_ORT_Workflow_Community_Model.html @@ -902,14 +902,12 @@

External Resources

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -922,9 +920,7 @@

External Resources

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/KBase_Synthetic_Bacterial_Community_R2A.html b/docs/communities/KBase_Synthetic_Bacterial_Community_R2A.html index 8d6e4c003..8ae75d2ec 100644 --- a/docs/communities/KBase_Synthetic_Bacterial_Community_R2A.html +++ b/docs/communities/KBase_Synthetic_Bacterial_Community_R2A.html @@ -915,14 +915,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -935,9 +933,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Kombucha_KMC_IMBG1_Fermentation_Community.html b/docs/communities/Kombucha_KMC_IMBG1_Fermentation_Community.html index 2a6cbc78e..b36535c33 100644 --- a/docs/communities/Kombucha_KMC_IMBG1_Fermentation_Community.html +++ b/docs/communities/Kombucha_KMC_IMBG1_Fermentation_Community.html @@ -626,7 +626,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1052,9 +1050,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/LBNL_Brachypodium_Drought_SynCom15.html b/docs/communities/LBNL_Brachypodium_Drought_SynCom15.html index 794fbc7d6..1daad3ce1 100644 --- a/docs/communities/LBNL_Brachypodium_Drought_SynCom15.html +++ b/docs/communities/LBNL_Brachypodium_Drought_SynCom15.html @@ -499,7 +499,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -679,14 +679,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -699,9 +697,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/LBNL_Human_Gut_Interaction_SynCom.html b/docs/communities/LBNL_Human_Gut_Interaction_SynCom.html index 466bd73d8..c832b22fd 100644 --- a/docs/communities/LBNL_Human_Gut_Interaction_SynCom.html +++ b/docs/communities/LBNL_Human_Gut_Interaction_SynCom.html @@ -684,14 +684,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -704,9 +702,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/LBNL_Switchgrass_Soil_SynCom16.html b/docs/communities/LBNL_Switchgrass_Soil_SynCom16.html index 087321a64..eda5108a0 100644 --- a/docs/communities/LBNL_Switchgrass_Soil_SynCom16.html +++ b/docs/communities/LBNL_Switchgrass_Soil_SynCom16.html @@ -684,14 +684,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -704,9 +702,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Lac_Pavin_Stratified_Lake_Community.html b/docs/communities/Lac_Pavin_Stratified_Lake_Community.html index 5fefa5d7b..8987f8add 100644 --- a/docs/communities/Lac_Pavin_Stratified_Lake_Community.html +++ b/docs/communities/Lac_Pavin_Stratified_Lake_Community.html @@ -838,14 +838,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -858,9 +856,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Lake_Washington_Methane_Oxygen_Methylotroph_Community.html b/docs/communities/Lake_Washington_Methane_Oxygen_Methylotroph_Community.html index baa94a528..20a2a315a 100644 --- a/docs/communities/Lake_Washington_Methane_Oxygen_Methylotroph_Community.html +++ b/docs/communities/Lake_Washington_Methane_Oxygen_Methylotroph_Community.html @@ -1382,14 +1382,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1402,9 +1400,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Legume_Rhizobia_Mars_Simulant_Symbiosis.html b/docs/communities/Legume_Rhizobia_Mars_Simulant_Symbiosis.html index e4b15a9b6..648d3bcc0 100644 --- a/docs/communities/Legume_Rhizobia_Mars_Simulant_Symbiosis.html +++ b/docs/communities/Legume_Rhizobia_Mars_Simulant_Symbiosis.html @@ -557,7 +557,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -729,14 +729,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -749,9 +747,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Lotus_LjSC3.html b/docs/communities/Lotus_LjSC3.html index fea441195..05f19fd56 100644 --- a/docs/communities/Lotus_LjSC3.html +++ b/docs/communities/Lotus_LjSC3.html @@ -878,7 +878,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1781,9 +1779,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Lunar_Martian_Simulant_PGPB_Lettuce_SynCom.html b/docs/communities/Lunar_Martian_Simulant_PGPB_Lettuce_SynCom.html index 7cbd6d3f4..7316c1e88 100644 --- a/docs/communities/Lunar_Martian_Simulant_PGPB_Lettuce_SynCom.html +++ b/docs/communities/Lunar_Martian_Simulant_PGPB_Lettuce_SynCom.html @@ -661,7 +661,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1256,9 +1254,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Lunar_Simulant_Phosphate_Solubilizing_Bacteria_Nicotiana.html b/docs/communities/Lunar_Simulant_Phosphate_Solubilizing_Bacteria_Nicotiana.html index f0b741970..74fc2181d 100644 --- a/docs/communities/Lunar_Simulant_Phosphate_Solubilizing_Bacteria_Nicotiana.html +++ b/docs/communities/Lunar_Simulant_Phosphate_Solubilizing_Bacteria_Nicotiana.html @@ -1174,14 +1174,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1194,9 +1192,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/MAMC_M48_Lignocellulose.html b/docs/communities/MAMC_M48_Lignocellulose.html index be3b30d6f..6ac10d7f8 100644 --- a/docs/communities/MAMC_M48_Lignocellulose.html +++ b/docs/communities/MAMC_M48_Lignocellulose.html @@ -1204,14 +1204,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1224,9 +1222,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/MSC1_Dominant_Core.html b/docs/communities/MSC1_Dominant_Core.html index 6532435e9..61dbd56da 100644 --- a/docs/communities/MSC1_Dominant_Core.html +++ b/docs/communities/MSC1_Dominant_Core.html @@ -1807,14 +1807,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1827,9 +1825,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/MSC2_Model_Soil_Consortium.html b/docs/communities/MSC2_Model_Soil_Consortium.html index 7d14687cb..de5866323 100644 --- a/docs/communities/MSC2_Model_Soil_Consortium.html +++ b/docs/communities/MSC2_Model_Soil_Consortium.html @@ -962,14 +962,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -982,9 +980,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/MUCC_Freshwater_Wetland_Methane_Network_Community.html b/docs/communities/MUCC_Freshwater_Wetland_Methane_Network_Community.html index 5aec8f2e1..04fe670a9 100644 --- a/docs/communities/MUCC_Freshwater_Wetland_Methane_Network_Community.html +++ b/docs/communities/MUCC_Freshwater_Wetland_Methane_Network_Community.html @@ -1303,14 +1303,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1323,9 +1321,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Maize_Benzoxazinoid_Metabolizing_SynComs.html b/docs/communities/Maize_Benzoxazinoid_Metabolizing_SynComs.html index 9ebb7408f..edae54f0a 100644 --- a/docs/communities/Maize_Benzoxazinoid_Metabolizing_SynComs.html +++ b/docs/communities/Maize_Benzoxazinoid_Metabolizing_SynComs.html @@ -679,14 +679,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -699,9 +697,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Maize_Drought_Response_SynCom.html b/docs/communities/Maize_Drought_Response_SynCom.html index b254281f9..f45c6950a 100644 --- a/docs/communities/Maize_Drought_Response_SynCom.html +++ b/docs/communities/Maize_Drought_Response_SynCom.html @@ -499,7 +499,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -674,14 +674,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -694,9 +692,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Maize_Root_Simplified_Community.html b/docs/communities/Maize_Root_Simplified_Community.html index 1769365c1..7390baa67 100644 --- a/docs/communities/Maize_Root_Simplified_Community.html +++ b/docs/communities/Maize_Root_Simplified_Community.html @@ -778,7 +778,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1592,9 +1590,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Medicago_Nodule_Biofertilizer_SynCom.html b/docs/communities/Medicago_Nodule_Biofertilizer_SynCom.html index e09eb1f6f..69f9762da 100644 --- a/docs/communities/Medicago_Nodule_Biofertilizer_SynCom.html +++ b/docs/communities/Medicago_Nodule_Biofertilizer_SynCom.html @@ -541,7 +541,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -729,14 +729,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -749,9 +747,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Mediterranean_Grassland_qSIP_Rainfall_Community.html b/docs/communities/Mediterranean_Grassland_qSIP_Rainfall_Community.html index 7e6b90f38..07847318c 100644 --- a/docs/communities/Mediterranean_Grassland_qSIP_Rainfall_Community.html +++ b/docs/communities/Mediterranean_Grassland_qSIP_Rainfall_Community.html @@ -760,14 +760,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -780,9 +778,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Mercury_SFA_EFPC_Sediment_Community.html b/docs/communities/Mercury_SFA_EFPC_Sediment_Community.html index 9f616b644..cc1455e0c 100644 --- a/docs/communities/Mercury_SFA_EFPC_Sediment_Community.html +++ b/docs/communities/Mercury_SFA_EFPC_Sediment_Community.html @@ -1212,14 +1212,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1232,9 +1230,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Mesorhizobium_Synechococcus_B12_Synthetic_Consortium.html b/docs/communities/Mesorhizobium_Synechococcus_B12_Synthetic_Consortium.html index 1c792d6c8..b2ee4155e 100644 --- a/docs/communities/Mesorhizobium_Synechococcus_B12_Synthetic_Consortium.html +++ b/docs/communities/Mesorhizobium_Synechococcus_B12_Synthetic_Consortium.html @@ -976,14 +976,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -996,9 +994,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Methane_Oxidation_CrVI_Reduction_SynCom.html b/docs/communities/Methane_Oxidation_CrVI_Reduction_SynCom.html index b771f5a60..e7352fd87 100644 --- a/docs/communities/Methane_Oxidation_CrVI_Reduction_SynCom.html +++ b/docs/communities/Methane_Oxidation_CrVI_Reduction_SynCom.html @@ -763,14 +763,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -783,9 +781,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Methylacidiphilum_Galdieria_Thermoacidophilic_Coculture.html b/docs/communities/Methylacidiphilum_Galdieria_Thermoacidophilic_Coculture.html index 3b37c458d..7f79f71a8 100644 --- a/docs/communities/Methylacidiphilum_Galdieria_Thermoacidophilic_Coculture.html +++ b/docs/communities/Methylacidiphilum_Galdieria_Thermoacidophilic_Coculture.html @@ -569,7 +569,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1140,9 +1138,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Methylocaldum_Cupriavidus_Methane_Acetate_Crossfeeding_Coculture.html b/docs/communities/Methylocaldum_Cupriavidus_Methane_Acetate_Crossfeeding_Coculture.html index 9db20a09f..324ec7601 100644 --- a/docs/communities/Methylocaldum_Cupriavidus_Methane_Acetate_Crossfeeding_Coculture.html +++ b/docs/communities/Methylocaldum_Cupriavidus_Methane_Acetate_Crossfeeding_Coculture.html @@ -1055,14 +1055,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1075,9 +1073,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Methylocaldum_Methyloceanibacter_Methane_Crossfeeding_Coculture.html b/docs/communities/Methylocaldum_Methyloceanibacter_Methane_Crossfeeding_Coculture.html index 5fad03ca1..44bca111f 100644 --- a/docs/communities/Methylocaldum_Methyloceanibacter_Methane_Crossfeeding_Coculture.html +++ b/docs/communities/Methylocaldum_Methyloceanibacter_Methane_Crossfeeding_Coculture.html @@ -1031,14 +1031,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1051,9 +1049,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Methylocystis_Rhodococcus_Methane_VFA_PHBV_Coculture.html b/docs/communities/Methylocystis_Rhodococcus_Methane_VFA_PHBV_Coculture.html index 5d0bb46e9..9bda34c76 100644 --- a/docs/communities/Methylocystis_Rhodococcus_Methane_VFA_PHBV_Coculture.html +++ b/docs/communities/Methylocystis_Rhodococcus_Methane_VFA_PHBV_Coculture.html @@ -1034,14 +1034,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1054,9 +1052,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Methylomicrobium_Chlorella_Methane_Sequestration_Coculture.html b/docs/communities/Methylomicrobium_Chlorella_Methane_Sequestration_Coculture.html index 1e38d82e5..f784a084f 100644 --- a/docs/communities/Methylomicrobium_Chlorella_Methane_Sequestration_Coculture.html +++ b/docs/communities/Methylomicrobium_Chlorella_Methane_Sequestration_Coculture.html @@ -573,7 +573,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1243,9 +1241,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Methylotuvimicrobium_Synechococcus_Gas_Feedstock_Coculture.html b/docs/communities/Methylotuvimicrobium_Synechococcus_Gas_Feedstock_Coculture.html index 177c5cb3e..cc50be726 100644 --- a/docs/communities/Methylotuvimicrobium_Synechococcus_Gas_Feedstock_Coculture.html +++ b/docs/communities/Methylotuvimicrobium_Synechococcus_Gas_Feedstock_Coculture.html @@ -569,7 +569,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1040,14 +1040,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1060,9 +1058,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Microcoleus_Massilia_Cyanosphere_Urea_Mutualism.html b/docs/communities/Microcoleus_Massilia_Cyanosphere_Urea_Mutualism.html index a894a8aad..7634c08cc 100644 --- a/docs/communities/Microcoleus_Massilia_Cyanosphere_Urea_Mutualism.html +++ b/docs/communities/Microcoleus_Massilia_Cyanosphere_Urea_Mutualism.html @@ -573,7 +573,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1120,9 +1118,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Miscanthus_REE_Tailings_Nitrogen_SynCom10.html b/docs/communities/Miscanthus_REE_Tailings_Nitrogen_SynCom10.html index 7a2b3d26c..555aa1050 100644 --- a/docs/communities/Miscanthus_REE_Tailings_Nitrogen_SynCom10.html +++ b/docs/communities/Miscanthus_REE_Tailings_Nitrogen_SynCom10.html @@ -667,7 +667,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -779,14 +779,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -799,9 +797,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Mixed_Gallium_LED_Recovery_Consortium.html b/docs/communities/Mixed_Gallium_LED_Recovery_Consortium.html index a7b90a2b8..500d6d5f2 100644 --- a/docs/communities/Mixed_Gallium_LED_Recovery_Consortium.html +++ b/docs/communities/Mixed_Gallium_LED_Recovery_Consortium.html @@ -617,7 +617,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1191,9 +1189,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Model_Cyanobacterial_Consortia_Core_Microbiome.html b/docs/communities/Model_Cyanobacterial_Consortia_Core_Microbiome.html index d9d8e40b9..4e2fecd9e 100644 --- a/docs/communities/Model_Cyanobacterial_Consortia_Core_Microbiome.html +++ b/docs/communities/Model_Cyanobacterial_Consortia_Core_Microbiome.html @@ -549,7 +549,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -946,9 +944,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Model_Lignocellulose_Formaldehyde_Crossfeeding_Community.html b/docs/communities/Model_Lignocellulose_Formaldehyde_Crossfeeding_Community.html index dc2cbbf54..6c9f71c32 100644 --- a/docs/communities/Model_Lignocellulose_Formaldehyde_Crossfeeding_Community.html +++ b/docs/communities/Model_Lignocellulose_Formaldehyde_Crossfeeding_Community.html @@ -637,7 +637,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1188,9 +1186,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Moss_Microbe_Complex_Regolith_Biofertilizer.html b/docs/communities/Moss_Microbe_Complex_Regolith_Biofertilizer.html index f54acbc9b..d018d434b 100644 --- a/docs/communities/Moss_Microbe_Complex_Regolith_Biofertilizer.html +++ b/docs/communities/Moss_Microbe_Complex_Regolith_Biofertilizer.html @@ -581,7 +581,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Environmental Factors (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -772,9 +770,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Multi_stage_Anaerobic_Digestion_SynCom_YSJ_and_SynCom_J.html b/docs/communities/Multi_stage_Anaerobic_Digestion_SynCom_YSJ_and_SynCom_J.html index 297743e57..78f85d5b5 100644 --- a/docs/communities/Multi_stage_Anaerobic_Digestion_SynCom_YSJ_and_SynCom_J.html +++ b/docs/communities/Multi_stage_Anaerobic_Digestion_SynCom_YSJ_and_SynCom_J.html @@ -649,14 +649,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -669,9 +667,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Multiomics_Corn_Straw_Degradation_SynCom.html b/docs/communities/Multiomics_Corn_Straw_Degradation_SynCom.html index 22d12cda2..db6868afe 100644 --- a/docs/communities/Multiomics_Corn_Straw_Degradation_SynCom.html +++ b/docs/communities/Multiomics_Corn_Straw_Degradation_SynCom.html @@ -499,7 +499,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -661,14 +661,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -681,9 +679,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Mushroom_Spring_Hot_Spring_Phototrophic_Mat_Community.html b/docs/communities/Mushroom_Spring_Hot_Spring_Phototrophic_Mat_Community.html index b55652ce9..558be4333 100644 --- a/docs/communities/Mushroom_Spring_Hot_Spring_Phototrophic_Mat_Community.html +++ b/docs/communities/Mushroom_Spring_Hot_Spring_Phototrophic_Mat_Community.html @@ -1109,14 +1109,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1129,9 +1127,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/NCycle_Bioflocculation_Model_Consortium.html b/docs/communities/NCycle_Bioflocculation_Model_Consortium.html index d784477ce..7dbd3e8c1 100644 --- a/docs/communities/NCycle_Bioflocculation_Model_Consortium.html +++ b/docs/communities/NCycle_Bioflocculation_Model_Consortium.html @@ -666,14 +666,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -686,9 +684,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Naica_Deep_Subsurface_Thermophilic.html b/docs/communities/Naica_Deep_Subsurface_Thermophilic.html index 574181205..b500999a0 100644 --- a/docs/communities/Naica_Deep_Subsurface_Thermophilic.html +++ b/docs/communities/Naica_Deep_Subsurface_Thermophilic.html @@ -1278,14 +1278,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1298,9 +1296,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Neocallimastix_Methanobrevibacter_Xylan_Coculture.html b/docs/communities/Neocallimastix_Methanobrevibacter_Xylan_Coculture.html index 7f7f847a0..e4992b7c6 100644 --- a/docs/communities/Neocallimastix_Methanobrevibacter_Xylan_Coculture.html +++ b/docs/communities/Neocallimastix_Methanobrevibacter_Xylan_Coculture.html @@ -970,14 +970,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -990,9 +988,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Ngawha_Geothermal_Mercury_Cycling_Community.html b/docs/communities/Ngawha_Geothermal_Mercury_Cycling_Community.html index 497035cb4..40ca899d1 100644 --- a/docs/communities/Ngawha_Geothermal_Mercury_Cycling_Community.html +++ b/docs/communities/Ngawha_Geothermal_Mercury_Cycling_Community.html @@ -854,14 +854,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -874,9 +872,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/OMM12_Gnotobiotic_Mouse_Gut_Community.html b/docs/communities/OMM12_Gnotobiotic_Mouse_Gut_Community.html index 41534f941..2703557f5 100644 --- a/docs/communities/OMM12_Gnotobiotic_Mouse_Gut_Community.html +++ b/docs/communities/OMM12_Gnotobiotic_Mouse_Gut_Community.html @@ -813,14 +813,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -833,9 +831,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/ORNL_Clostridium_Desulfovibrio_Geobacter_Trophic_Model.html b/docs/communities/ORNL_Clostridium_Desulfovibrio_Geobacter_Trophic_Model.html index ce41bff05..f7685c9f0 100644 --- a/docs/communities/ORNL_Clostridium_Desulfovibrio_Geobacter_Trophic_Model.html +++ b/docs/communities/ORNL_Clostridium_Desulfovibrio_Geobacter_Trophic_Model.html @@ -1285,14 +1285,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1305,9 +1303,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/ORNL_PMI_Populus_PD10_SynCom.html b/docs/communities/ORNL_PMI_Populus_PD10_SynCom.html index 5f8a67325..b653b3486 100644 --- a/docs/communities/ORNL_PMI_Populus_PD10_SynCom.html +++ b/docs/communities/ORNL_PMI_Populus_PD10_SynCom.html @@ -1642,14 +1642,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1662,9 +1660,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Oak_Ridge_FRC_Uranium_Nitrate_Groundwater_Community.html b/docs/communities/Oak_Ridge_FRC_Uranium_Nitrate_Groundwater_Community.html index 721de39dc..de08e9c4a 100644 --- a/docs/communities/Oak_Ridge_FRC_Uranium_Nitrate_Groundwater_Community.html +++ b/docs/communities/Oak_Ridge_FRC_Uranium_Nitrate_Groundwater_Community.html @@ -924,14 +924,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -944,9 +942,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Okeke_Lu_Cellulolytic_Consortium.html b/docs/communities/Okeke_Lu_Cellulolytic_Consortium.html index ed90f8fa0..d51299e18 100644 --- a/docs/communities/Okeke_Lu_Cellulolytic_Consortium.html +++ b/docs/communities/Okeke_Lu_Cellulolytic_Consortium.html @@ -1228,14 +1228,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1248,9 +1246,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Ostreococcus_Dinoroseobacter_BVitamin_Mutualism.html b/docs/communities/Ostreococcus_Dinoroseobacter_BVitamin_Mutualism.html index ee78cc46d..f856d2abe 100644 --- a/docs/communities/Ostreococcus_Dinoroseobacter_BVitamin_Mutualism.html +++ b/docs/communities/Ostreococcus_Dinoroseobacter_BVitamin_Mutualism.html @@ -564,7 +564,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -965,14 +965,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -985,9 +983,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/PET_Artificial_FourSpecies_Degradation_Consortium.html b/docs/communities/PET_Artificial_FourSpecies_Degradation_Consortium.html index ec2dd3633..b364fe043 100644 --- a/docs/communities/PET_Artificial_FourSpecies_Degradation_Consortium.html +++ b/docs/communities/PET_Artificial_FourSpecies_Degradation_Consortium.html @@ -1256,14 +1256,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1276,9 +1274,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/PGM_Spent_Catalyst_Bioleaching.html b/docs/communities/PGM_Spent_Catalyst_Bioleaching.html index d9b820c4b..b04ee62e3 100644 --- a/docs/communities/PGM_Spent_Catalyst_Bioleaching.html +++ b/docs/communities/PGM_Spent_Catalyst_Bioleaching.html @@ -698,7 +698,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1575,9 +1573,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/PMI_Variovorax_Thermotolerance_Collection.html b/docs/communities/PMI_Variovorax_Thermotolerance_Collection.html index 79fb73d03..8248b24fd 100644 --- a/docs/communities/PMI_Variovorax_Thermotolerance_Collection.html +++ b/docs/communities/PMI_Variovorax_Thermotolerance_Collection.html @@ -709,7 +709,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -971,14 +971,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -991,9 +989,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/PSY_Transgenic_Rice_Rhizosphere_Methane_Community.html b/docs/communities/PSY_Transgenic_Rice_Rhizosphere_Methane_Community.html index f786f3bb7..5aece8634 100644 --- a/docs/communities/PSY_Transgenic_Rice_Rhizosphere_Methane_Community.html +++ b/docs/communities/PSY_Transgenic_Rice_Rhizosphere_Methane_Community.html @@ -943,14 +943,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -963,9 +961,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Panzhihua_Vanadium_Titanium_Tailings.html b/docs/communities/Panzhihua_Vanadium_Titanium_Tailings.html index 016fae91c..172a4974c 100644 --- a/docs/communities/Panzhihua_Vanadium_Titanium_Tailings.html +++ b/docs/communities/Panzhihua_Vanadium_Titanium_Tailings.html @@ -775,7 +775,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1709,9 +1707,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Parachlorella_Saccharomyces_Mutualistic_Coculture.html b/docs/communities/Parachlorella_Saccharomyces_Mutualistic_Coculture.html index 597880bd2..a82662a1f 100644 --- a/docs/communities/Parachlorella_Saccharomyces_Mutualistic_Coculture.html +++ b/docs/communities/Parachlorella_Saccharomyces_Mutualistic_Coculture.html @@ -548,7 +548,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -779,14 +779,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -799,9 +797,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Peanut_Seed_Bacterial_CS_SynCom.html b/docs/communities/Peanut_Seed_Bacterial_CS_SynCom.html index 16cdc5cb1..88b96cfde 100644 --- a/docs/communities/Peanut_Seed_Bacterial_CS_SynCom.html +++ b/docs/communities/Peanut_Seed_Bacterial_CS_SynCom.html @@ -499,7 +499,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -611,14 +611,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -631,9 +629,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pelotomaculum_Methanocella_Propionate_RNASeq_Coculture.html b/docs/communities/Pelotomaculum_Methanocella_Propionate_RNASeq_Coculture.html index 641e5ba45..8dff503d7 100644 --- a/docs/communities/Pelotomaculum_Methanocella_Propionate_RNASeq_Coculture.html +++ b/docs/communities/Pelotomaculum_Methanocella_Propionate_RNASeq_Coculture.html @@ -573,7 +573,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1295,9 +1293,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pelotomaculum_Methanothermobacter_Syntrophy.html b/docs/communities/Pelotomaculum_Methanothermobacter_Syntrophy.html index 8224666ec..a0e926fe3 100644 --- a/docs/communities/Pelotomaculum_Methanothermobacter_Syntrophy.html +++ b/docs/communities/Pelotomaculum_Methanothermobacter_Syntrophy.html @@ -1307,14 +1307,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1327,9 +1325,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pepper_Growth_Rhizosphere_SynCom.html b/docs/communities/Pepper_Growth_Rhizosphere_SynCom.html index dd6e0b3df..bb0ba6cbc 100644 --- a/docs/communities/Pepper_Growth_Rhizosphere_SynCom.html +++ b/docs/communities/Pepper_Growth_Rhizosphere_SynCom.html @@ -499,7 +499,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -679,14 +679,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -699,9 +697,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pepper_Phytophthora_SynCom5.html b/docs/communities/Pepper_Phytophthora_SynCom5.html index 8a095a023..5287b301f 100644 --- a/docs/communities/Pepper_Phytophthora_SynCom5.html +++ b/docs/communities/Pepper_Phytophthora_SynCom5.html @@ -625,7 +625,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -805,14 +805,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -825,9 +823,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Phenol_Carboxylation_Consortium.html b/docs/communities/Phenol_Carboxylation_Consortium.html index a68e58171..92edfdb5d 100644 --- a/docs/communities/Phenol_Carboxylation_Consortium.html +++ b/docs/communities/Phenol_Carboxylation_Consortium.html @@ -953,14 +953,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -973,9 +971,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Phormidium_Alkaline_Consortium.html b/docs/communities/Phormidium_Alkaline_Consortium.html index bab488549..5f05a41be 100644 --- a/docs/communities/Phormidium_Alkaline_Consortium.html +++ b/docs/communities/Phormidium_Alkaline_Consortium.html @@ -721,7 +721,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1451,14 +1451,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1471,9 +1469,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Phosphitivorax_Methanoculleus_Lithosyntrophy_Phosphite_Coculture.html b/docs/communities/Phosphitivorax_Methanoculleus_Lithosyntrophy_Phosphite_Coculture.html index 4bb28c2c7..b94582933 100644 --- a/docs/communities/Phosphitivorax_Methanoculleus_Lithosyntrophy_Phosphite_Coculture.html +++ b/docs/communities/Phosphitivorax_Methanoculleus_Lithosyntrophy_Phosphite_Coculture.html @@ -708,14 +708,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -728,9 +726,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Phylogenetically_Diverse_Denitrifying_SynCom.html b/docs/communities/Phylogenetically_Diverse_Denitrifying_SynCom.html index 6f729a54c..9d84eb9ed 100644 --- a/docs/communities/Phylogenetically_Diverse_Denitrifying_SynCom.html +++ b/docs/communities/Phylogenetically_Diverse_Denitrifying_SynCom.html @@ -776,14 +776,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -796,9 +794,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pinus_armandii_Endophytic_Biocontrol_SynCom.html b/docs/communities/Pinus_armandii_Endophytic_Biocontrol_SynCom.html index 3a416279a..9c4072c19 100644 --- a/docs/communities/Pinus_armandii_Endophytic_Biocontrol_SynCom.html +++ b/docs/communities/Pinus_armandii_Endophytic_Biocontrol_SynCom.html @@ -749,14 +749,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -769,9 +767,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pleuromutilin_Degrading_Artificial_Consortium_5_Strain.html b/docs/communities/Pleuromutilin_Degrading_Artificial_Consortium_5_Strain.html index 9fabd826a..ebdf272c3 100644 --- a/docs/communities/Pleuromutilin_Degrading_Artificial_Consortium_5_Strain.html +++ b/docs/communities/Pleuromutilin_Degrading_Artificial_Consortium_5_Strain.html @@ -758,14 +758,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -778,9 +776,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Polaromonas_Vanadium_Reduction_Community.html b/docs/communities/Polaromonas_Vanadium_Reduction_Community.html index 33bb4d65a..2e61d51d2 100644 --- a/docs/communities/Polaromonas_Vanadium_Reduction_Community.html +++ b/docs/communities/Polaromonas_Vanadium_Reduction_Community.html @@ -703,7 +703,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Environmental Factors (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1337,9 +1335,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Populus_Salt_Tolerant_SynComs.html b/docs/communities/Populus_Salt_Tolerant_SynComs.html index 63b843366..e685ed408 100644 --- a/docs/communities/Populus_Salt_Tolerant_SynComs.html +++ b/docs/communities/Populus_Salt_Tolerant_SynComs.html @@ -499,7 +499,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -611,14 +611,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -631,9 +629,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Prairie_Pothole_Wetland_Sulfur_Carbon_Virus_Community.html b/docs/communities/Prairie_Pothole_Wetland_Sulfur_Carbon_Virus_Community.html index 1aa1c2d3b..40bfdecd5 100644 --- a/docs/communities/Prairie_Pothole_Wetland_Sulfur_Carbon_Virus_Community.html +++ b/docs/communities/Prairie_Pothole_Wetland_Sulfur_Carbon_Virus_Community.html @@ -663,7 +663,7 @@

Ecological Interactions

Ecological interaction network for Prairie Pothole Wetland Sulfur-Carbon Virus-Host Community - Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (cross-feeding, niche partitioning, predation). + Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (cross-feeding, niche partitioning).
@@ -681,8 +681,8 @@

Ecological Interactions

Predation + aria-hidden="true" data-symbol="symbolTriangle2" + data-color="#929caa"> Other
@@ -1264,14 +1264,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1284,9 +1282,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Premature_Infant_Gut_Escherichia_Diametric_Ratio_Community.html b/docs/communities/Premature_Infant_Gut_Escherichia_Diametric_Ratio_Community.html index 0b7b258b7..c1f3703e7 100644 --- a/docs/communities/Premature_Infant_Gut_Escherichia_Diametric_Ratio_Community.html +++ b/docs/communities/Premature_Infant_Gut_Escherichia_Diametric_Ratio_Community.html @@ -766,14 +766,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -786,9 +784,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Prochlorococcus_Alteromonas_Helper_Coculture.html b/docs/communities/Prochlorococcus_Alteromonas_Helper_Coculture.html index 6a24c42ec..2432b2b72 100644 --- a/docs/communities/Prochlorococcus_Alteromonas_Helper_Coculture.html +++ b/docs/communities/Prochlorococcus_Alteromonas_Helper_Coculture.html @@ -909,14 +909,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -929,9 +927,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Propanotrophic_Chlorinated_Ethene_Cometabolism_Enrichment.html b/docs/communities/Propanotrophic_Chlorinated_Ethene_Cometabolism_Enrichment.html index 0ac89b5c1..ac8ddca3d 100644 --- a/docs/communities/Propanotrophic_Chlorinated_Ethene_Cometabolism_Enrichment.html +++ b/docs/communities/Propanotrophic_Chlorinated_Ethene_Cometabolism_Enrichment.html @@ -1381,14 +1381,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1401,9 +1399,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pseudomonas_Pedobacter_Social_Spreading_Coculture.html b/docs/communities/Pseudomonas_Pedobacter_Social_Spreading_Coculture.html index 719a78a71..019b696f5 100644 --- a/docs/communities/Pseudomonas_Pedobacter_Social_Spreading_Coculture.html +++ b/docs/communities/Pseudomonas_Pedobacter_Social_Spreading_Coculture.html @@ -564,7 +564,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -997,9 +995,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pseudomonas_Rhodococcus_Chloronitrobenzene_Coculture.html b/docs/communities/Pseudomonas_Rhodococcus_Chloronitrobenzene_Coculture.html index e05931379..1517133c0 100644 --- a/docs/communities/Pseudomonas_Rhodococcus_Chloronitrobenzene_Coculture.html +++ b/docs/communities/Pseudomonas_Rhodococcus_Chloronitrobenzene_Coculture.html @@ -1112,14 +1112,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1132,9 +1130,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pseudomonas_putida_PpTE_Rhodococcus_RDK17_Terephthalic_Acid_Consortium.html b/docs/communities/Pseudomonas_putida_PpTE_Rhodococcus_RDK17_Terephthalic_Acid_Consortium.html index f5cc29a44..49ae272b3 100644 --- a/docs/communities/Pseudomonas_putida_PpTE_Rhodococcus_RDK17_Terephthalic_Acid_Consortium.html +++ b/docs/communities/Pseudomonas_putida_PpTE_Rhodococcus_RDK17_Terephthalic_Acid_Consortium.html @@ -727,14 +727,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -747,9 +745,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pseudomonas_stutzeri_Rhodococcus_Naphthalene_Biochar_Engineered_Consortium.html b/docs/communities/Pseudomonas_stutzeri_Rhodococcus_Naphthalene_Biochar_Engineered_Consortium.html index a2d14135e..b99e51fcd 100644 --- a/docs/communities/Pseudomonas_stutzeri_Rhodococcus_Naphthalene_Biochar_Engineered_Consortium.html +++ b/docs/communities/Pseudomonas_stutzeri_Rhodococcus_Naphthalene_Biochar_Engineered_Consortium.html @@ -676,14 +676,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -696,9 +694,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Pseudonitzschia_Sulfitobacter_Association.html b/docs/communities/Pseudonitzschia_Sulfitobacter_Association.html index 2eb872af9..0cac0cbea 100644 --- a/docs/communities/Pseudonitzschia_Sulfitobacter_Association.html +++ b/docs/communities/Pseudonitzschia_Sulfitobacter_Association.html @@ -542,7 +542,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1051,14 +1051,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1071,9 +1069,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Rammelsberg_Cobalt_Nickel_Tailings.html b/docs/communities/Rammelsberg_Cobalt_Nickel_Tailings.html index b3031bfb7..d21c70549 100644 --- a/docs/communities/Rammelsberg_Cobalt_Nickel_Tailings.html +++ b/docs/communities/Rammelsberg_Cobalt_Nickel_Tailings.html @@ -555,7 +555,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Environmental Factors (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1131,9 +1129,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Rhodopseudomonas_Ecoli_CrossFeeding_Coculture.html b/docs/communities/Rhodopseudomonas_Ecoli_CrossFeeding_Coculture.html index 044f9b286..23fad6f29 100644 --- a/docs/communities/Rhodopseudomonas_Ecoli_CrossFeeding_Coculture.html +++ b/docs/communities/Rhodopseudomonas_Ecoli_CrossFeeding_Coculture.html @@ -739,14 +739,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -759,9 +757,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.html b/docs/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.html index 41dc3f9be..e674328e1 100644 --- a/docs/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.html +++ b/docs/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.html @@ -1191,14 +1191,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1211,9 +1209,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Rice_Acid_Soil_Bioinoculant_SynCom.html b/docs/communities/Rice_Acid_Soil_Bioinoculant_SynCom.html index 9e1a7694b..7b081a524 100644 --- a/docs/communities/Rice_Acid_Soil_Bioinoculant_SynCom.html +++ b/docs/communities/Rice_Acid_Soil_Bioinoculant_SynCom.html @@ -499,7 +499,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -611,14 +611,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -631,9 +629,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Rice_Duckweed_Bacillus_SynCom.html b/docs/communities/Rice_Duckweed_Bacillus_SynCom.html index 073a69878..6a6bb24d0 100644 --- a/docs/communities/Rice_Duckweed_Bacillus_SynCom.html +++ b/docs/communities/Rice_Duckweed_Bacillus_SynCom.html @@ -625,7 +625,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -877,9 +875,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Rice_P_Uptake_Intercropping_SynCom4.html b/docs/communities/Rice_P_Uptake_Intercropping_SynCom4.html index 030f1b143..86987cdc8 100644 --- a/docs/communities/Rice_P_Uptake_Intercropping_SynCom4.html +++ b/docs/communities/Rice_P_Uptake_Intercropping_SynCom4.html @@ -625,7 +625,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -792,14 +792,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -812,9 +810,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Richmond_Mine_AMD_Biofilm.html b/docs/communities/Richmond_Mine_AMD_Biofilm.html index fc9de6f9c..05959946e 100644 --- a/docs/communities/Richmond_Mine_AMD_Biofilm.html +++ b/docs/communities/Richmond_Mine_AMD_Biofilm.html @@ -783,7 +783,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1976,9 +1974,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Rifle_Aquifer_Bioanode_EET_Community.html b/docs/communities/Rifle_Aquifer_Bioanode_EET_Community.html index 8ea9d5972..9a3104399 100644 --- a/docs/communities/Rifle_Aquifer_Bioanode_EET_Community.html +++ b/docs/communities/Rifle_Aquifer_Bioanode_EET_Community.html @@ -1048,14 +1048,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1068,9 +1066,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Rifle_Uranium_Reducing_Community.html b/docs/communities/Rifle_Uranium_Reducing_Community.html index 42e1b6a4e..483764bbd 100644 --- a/docs/communities/Rifle_Uranium_Reducing_Community.html +++ b/docs/communities/Rifle_Uranium_Reducing_Community.html @@ -710,7 +710,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1471,9 +1469,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SF356_Cellulose_Degrader.html b/docs/communities/SF356_Cellulose_Degrader.html index 3c1c3e8d3..62f544365 100644 --- a/docs/communities/SF356_Cellulose_Degrader.html +++ b/docs/communities/SF356_Cellulose_Degrader.html @@ -673,7 +673,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1239,9 +1237,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SIHUMIx_Human_Intestinal_Model_Community.html b/docs/communities/SIHUMIx_Human_Intestinal_Model_Community.html index 38c6225d5..903fe3bc8 100644 --- a/docs/communities/SIHUMIx_Human_Intestinal_Model_Community.html +++ b/docs/communities/SIHUMIx_Human_Intestinal_Model_Community.html @@ -1176,14 +1176,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1196,9 +1194,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SMutans_CAlbicans_ECC_Biofilm.html b/docs/communities/SMutans_CAlbicans_ECC_Biofilm.html index 2f42ccfdc..8b41d50d0 100644 --- a/docs/communities/SMutans_CAlbicans_ECC_Biofilm.html +++ b/docs/communities/SMutans_CAlbicans_ECC_Biofilm.html @@ -529,7 +529,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -796,9 +794,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SMutans_SSputigena_ECC_Pathobiont.html b/docs/communities/SMutans_SSputigena_ECC_Pathobiont.html index 36c3ef71a..661fee5f6 100644 --- a/docs/communities/SMutans_SSputigena_ECC_Pathobiont.html +++ b/docs/communities/SMutans_SSputigena_ECC_Pathobiont.html @@ -717,14 +717,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -737,9 +735,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SMutans_VParvula_ASC_Biofilm.html b/docs/communities/SMutans_VParvula_ASC_Biofilm.html index 27c07e0ac..8e7dbf0e2 100644 --- a/docs/communities/SMutans_VParvula_ASC_Biofilm.html +++ b/docs/communities/SMutans_VParvula_ASC_Biofilm.html @@ -717,14 +717,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -737,9 +735,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SPRUCE_Peatland_Methane_Cycling_Community.html b/docs/communities/SPRUCE_Peatland_Methane_Cycling_Community.html index 1a70f246d..487c3bc9e 100644 --- a/docs/communities/SPRUCE_Peatland_Methane_Cycling_Community.html +++ b/docs/communities/SPRUCE_Peatland_Methane_Cycling_Community.html @@ -898,14 +898,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -918,9 +916,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SPRUCE_Peatland_Warming_Community.html b/docs/communities/SPRUCE_Peatland_Warming_Community.html index 09b46dcf7..e9b0f6a67 100644 --- a/docs/communities/SPRUCE_Peatland_Warming_Community.html +++ b/docs/communities/SPRUCE_Peatland_Warming_Community.html @@ -654,7 +654,7 @@

Ecological Interactions

Ecological interaction network for SPRUCE Peatland Warming Microbial Community - Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (mutualism, niche partitioning, predation). + Bipartite graph where circle nodes represent taxa and each ecological interaction is drawn as a distinct non-circular symbol, with colour repeating the same distinction (mutualism, niche partitioning).
@@ -663,7 +663,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Ecological Interactions
Predation + aria-hidden="true" data-symbol="symbolTriangle2" + data-color="#929caa"> Other
@@ -1235,14 +1235,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1255,9 +1253,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Saanich_Inlet_OMZ_Redox_Gradient_Community.html b/docs/communities/Saanich_Inlet_OMZ_Redox_Gradient_Community.html index 475e501dd..6cdc8c5e2 100644 --- a/docs/communities/Saanich_Inlet_OMZ_Redox_Gradient_Community.html +++ b/docs/communities/Saanich_Inlet_OMZ_Redox_Gradient_Community.html @@ -967,14 +967,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -987,9 +985,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Saccharomyces_Acinetobacter_Lignocellulose_Detox_Coculture.html b/docs/communities/Saccharomyces_Acinetobacter_Lignocellulose_Detox_Coculture.html index 36cdabb57..9600da734 100644 --- a/docs/communities/Saccharomyces_Acinetobacter_Lignocellulose_Detox_Coculture.html +++ b/docs/communities/Saccharomyces_Acinetobacter_Lignocellulose_Detox_Coculture.html @@ -824,14 +824,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -844,9 +842,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Saccharomyces_Chlamydomonas_Fungal_Algal_Mutualism.html b/docs/communities/Saccharomyces_Chlamydomonas_Fungal_Algal_Mutualism.html index 75e6fc3f6..587ed6876 100644 --- a/docs/communities/Saccharomyces_Chlamydomonas_Fungal_Algal_Mutualism.html +++ b/docs/communities/Saccharomyces_Chlamydomonas_Fungal_Algal_Mutualism.html @@ -1022,14 +1022,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1042,9 +1040,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Salar_Atacama_Lithium_Brine_Community.html b/docs/communities/Salar_Atacama_Lithium_Brine_Community.html index bdbc2abb9..aefca1124 100644 --- a/docs/communities/Salar_Atacama_Lithium_Brine_Community.html +++ b/docs/communities/Salar_Atacama_Lithium_Brine_Community.html @@ -732,7 +732,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1375,9 +1373,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Shewanella_Denitrifying_Richness_SynComs.html b/docs/communities/Shewanella_Denitrifying_Richness_SynComs.html index 92e17418d..3122e48ee 100644 --- a/docs/communities/Shewanella_Denitrifying_Richness_SynComs.html +++ b/docs/communities/Shewanella_Denitrifying_Richness_SynComs.html @@ -684,14 +684,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -704,9 +702,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Shewanella_Geobacter_Exoelectrogenic_Biofilm_Community.html b/docs/communities/Shewanella_Geobacter_Exoelectrogenic_Biofilm_Community.html index 1852bd453..574fd1ac1 100644 --- a/docs/communities/Shewanella_Geobacter_Exoelectrogenic_Biofilm_Community.html +++ b/docs/communities/Shewanella_Geobacter_Exoelectrogenic_Biofilm_Community.html @@ -612,7 +612,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Environmental Factors (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1013,9 +1011,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Shewanella_Pseudomonas_Fe0_Electrosyntrophic_Denitrifying_Consortium.html b/docs/communities/Shewanella_Pseudomonas_Fe0_Electrosyntrophic_Denitrifying_Consortium.html index 5ee2e4fca..0340cf831 100644 --- a/docs/communities/Shewanella_Pseudomonas_Fe0_Electrosyntrophic_Denitrifying_Consortium.html +++ b/docs/communities/Shewanella_Pseudomonas_Fe0_Electrosyntrophic_Denitrifying_Consortium.html @@ -776,14 +776,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -796,9 +794,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Shewanella_Streptococcus_Starch_Microbial_Fuel_Cell.html b/docs/communities/Shewanella_Streptococcus_Starch_Microbial_Fuel_Cell.html index 0f1bb7066..47d934f83 100644 --- a/docs/communities/Shewanella_Streptococcus_Starch_Microbial_Fuel_Cell.html +++ b/docs/communities/Shewanella_Streptococcus_Starch_Microbial_Fuel_Cell.html @@ -1106,14 +1106,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1126,9 +1124,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Shewanella_oneidensis_Rhodopseudomonas_palustris_Electrosyntrophic_Coculture.html b/docs/communities/Shewanella_oneidensis_Rhodopseudomonas_palustris_Electrosyntrophic_Coculture.html index 74af4719a..ab64df3fb 100644 --- a/docs/communities/Shewanella_oneidensis_Rhodopseudomonas_palustris_Electrosyntrophic_Coculture.html +++ b/docs/communities/Shewanella_oneidensis_Rhodopseudomonas_palustris_Electrosyntrophic_Coculture.html @@ -623,14 +623,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -643,9 +641,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SkinCom_Synthetic_Skin_Community.html b/docs/communities/SkinCom_Synthetic_Skin_Community.html index c17d2fcdf..15b1d5f79 100644 --- a/docs/communities/SkinCom_Synthetic_Skin_Community.html +++ b/docs/communities/SkinCom_Synthetic_Skin_Community.html @@ -679,14 +679,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -699,9 +697,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Soil_BGC_Phylum_Depth_Vegetation_Community.html b/docs/communities/Soil_BGC_Phylum_Depth_Vegetation_Community.html index 76921103c..b9f81c1e8 100644 --- a/docs/communities/Soil_BGC_Phylum_Depth_Vegetation_Community.html +++ b/docs/communities/Soil_BGC_Phylum_Depth_Vegetation_Community.html @@ -868,14 +868,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -888,9 +886,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Soil_CPR_Nanoarchaea_Rare_Biosphere_Community.html b/docs/communities/Soil_CPR_Nanoarchaea_Rare_Biosphere_Community.html index ee47bd2ca..9176a4539 100644 --- a/docs/communities/Soil_CPR_Nanoarchaea_Rare_Biosphere_Community.html +++ b/docs/communities/Soil_CPR_Nanoarchaea_Rare_Biosphere_Community.html @@ -758,14 +758,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -778,9 +776,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Soil_Corrinoid_B12_Reservoir_Community.html b/docs/communities/Soil_Corrinoid_B12_Reservoir_Community.html index da3a8feb0..8c80fd65b 100644 --- a/docs/communities/Soil_Corrinoid_B12_Reservoir_Community.html +++ b/docs/communities/Soil_Corrinoid_B12_Reservoir_Community.html @@ -850,14 +850,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -870,9 +868,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Sorghum_SRC1_Subset.html b/docs/communities/Sorghum_SRC1_Subset.html index 472a2cfb2..0f3100908 100644 --- a/docs/communities/Sorghum_SRC1_Subset.html +++ b/docs/communities/Sorghum_SRC1_Subset.html @@ -752,7 +752,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1223,14 +1223,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1243,9 +1241,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/South_Bay_Salt_Pond_Methane_Restoration_Community.html b/docs/communities/South_Bay_Salt_Pond_Methane_Restoration_Community.html index 19bcb1c8d..3c95a8019 100644 --- a/docs/communities/South_Bay_Salt_Pond_Methane_Restoration_Community.html +++ b/docs/communities/South_Bay_Salt_Pond_Methane_Restoration_Community.html @@ -1146,14 +1146,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1166,9 +1164,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Soybean_Chlorophyll_Selected_Biofertilizer_SynCom.html b/docs/communities/Soybean_Chlorophyll_Selected_Biofertilizer_SynCom.html index f1fc62738..dc3fdfdef 100644 --- a/docs/communities/Soybean_Chlorophyll_Selected_Biofertilizer_SynCom.html +++ b/docs/communities/Soybean_Chlorophyll_Selected_Biofertilizer_SynCom.html @@ -729,14 +729,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -749,9 +747,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Soybean_N_Fixation_sfSynCom.html b/docs/communities/Soybean_N_Fixation_sfSynCom.html index 7f74ac7f7..9d42ddb02 100644 --- a/docs/communities/Soybean_N_Fixation_sfSynCom.html +++ b/docs/communities/Soybean_N_Fixation_sfSynCom.html @@ -626,7 +626,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1391,14 +1391,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1411,9 +1409,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Sphingobium_Rhodococcus_Lignin_Dimer_Valorization_Coculture.html b/docs/communities/Sphingobium_Rhodococcus_Lignin_Dimer_Valorization_Coculture.html index 0f0b2db6c..9841f7316 100644 --- a/docs/communities/Sphingobium_Rhodococcus_Lignin_Dimer_Valorization_Coculture.html +++ b/docs/communities/Sphingobium_Rhodococcus_Lignin_Dimer_Valorization_Coculture.html @@ -1019,14 +1019,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1039,9 +1037,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Stordalen_Mire_Methylotrophic_Methanogenesis_Community.html b/docs/communities/Stordalen_Mire_Methylotrophic_Methanogenesis_Community.html index f18d9ce0b..9a27aec31 100644 --- a/docs/communities/Stordalen_Mire_Methylotrophic_Methanogenesis_Community.html +++ b/docs/communities/Stordalen_Mire_Methylotrophic_Methanogenesis_Community.html @@ -1159,14 +1159,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1179,9 +1177,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Subsurface_Carboxydocella_CO_Aquifer_Community.html b/docs/communities/Subsurface_Carboxydocella_CO_Aquifer_Community.html index e8a10a97e..24ec36e11 100644 --- a/docs/communities/Subsurface_Carboxydocella_CO_Aquifer_Community.html +++ b/docs/communities/Subsurface_Carboxydocella_CO_Aquifer_Community.html @@ -747,14 +747,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -767,9 +765,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Suillus_Bacillus_Thiamine_Ectomycorrhizal_SynCom.html b/docs/communities/Suillus_Bacillus_Thiamine_Ectomycorrhizal_SynCom.html index de28b520e..65d63e7b3 100644 --- a/docs/communities/Suillus_Bacillus_Thiamine_Ectomycorrhizal_SynCom.html +++ b/docs/communities/Suillus_Bacillus_Thiamine_Ectomycorrhizal_SynCom.html @@ -620,7 +620,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1270,9 +1268,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Sulfide_Spring_Autotrophic_CPR_Biofilm.html b/docs/communities/Sulfide_Spring_Autotrophic_CPR_Biofilm.html index 124883efe..8c221b3b2 100644 --- a/docs/communities/Sulfide_Spring_Autotrophic_CPR_Biofilm.html +++ b/docs/communities/Sulfide_Spring_Autotrophic_CPR_Biofilm.html @@ -844,14 +844,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -864,9 +862,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SynComBac10_Chicken_Intestinal_SynCom.html b/docs/communities/SynComBac10_Chicken_Intestinal_SynCom.html index deb28202e..d41565e44 100644 --- a/docs/communities/SynComBac10_Chicken_Intestinal_SynCom.html +++ b/docs/communities/SynComBac10_Chicken_Intestinal_SynCom.html @@ -684,14 +684,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -704,9 +702,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SynCom_ARC_Peanut_Aflatoxin_Nodulation.html b/docs/communities/SynCom_ARC_Peanut_Aflatoxin_Nodulation.html index 9125a4ce7..ed5e7bf78 100644 --- a/docs/communities/SynCom_ARC_Peanut_Aflatoxin_Nodulation.html +++ b/docs/communities/SynCom_ARC_Peanut_Aflatoxin_Nodulation.html @@ -798,14 +798,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -818,9 +816,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SynCom_BsBv_Cigar_Tobacco_Leaf_Fermentation.html b/docs/communities/SynCom_BsBv_Cigar_Tobacco_Leaf_Fermentation.html index 8d77ced7d..05d3438d2 100644 --- a/docs/communities/SynCom_BsBv_Cigar_Tobacco_Leaf_Fermentation.html +++ b/docs/communities/SynCom_BsBv_Cigar_Tobacco_Leaf_Fermentation.html @@ -541,7 +541,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -749,9 +747,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SynCom_Chlorella_sorokiniana_Biogas_Slurry_Coupling_System.html b/docs/communities/SynCom_Chlorella_sorokiniana_Biogas_Slurry_Coupling_System.html index abd10041f..b2691bebe 100644 --- a/docs/communities/SynCom_Chlorella_sorokiniana_Biogas_Slurry_Coupling_System.html +++ b/docs/communities/SynCom_Chlorella_sorokiniana_Biogas_Slurry_Coupling_System.html @@ -676,14 +676,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -696,9 +694,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SynCom_MetG2_Rhizobacteria_Sugarcane_Stress_Resilience.html b/docs/communities/SynCom_MetG2_Rhizobacteria_Sugarcane_Stress_Resilience.html index 9795b1f42..354f4a1f9 100644 --- a/docs/communities/SynCom_MetG2_Rhizobacteria_Sugarcane_Stress_Resilience.html +++ b/docs/communities/SynCom_MetG2_Rhizobacteria_Sugarcane_Stress_Resilience.html @@ -535,7 +535,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -688,9 +686,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SynCom_Pseudomonas_Rahnella_Artemisia_Phytoremediation.html b/docs/communities/SynCom_Pseudomonas_Rahnella_Artemisia_Phytoremediation.html index 43d2ef4cd..603c53d53 100644 --- a/docs/communities/SynCom_Pseudomonas_Rahnella_Artemisia_Phytoremediation.html +++ b/docs/communities/SynCom_Pseudomonas_Rahnella_Artemisia_Phytoremediation.html @@ -615,14 +615,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -635,9 +633,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SynCom_Sesame_Flavor_Baijiu_Fuqu_13Genus.html b/docs/communities/SynCom_Sesame_Flavor_Baijiu_Fuqu_13Genus.html index 70d43e8ff..0c4b5a4a1 100644 --- a/docs/communities/SynCom_Sesame_Flavor_Baijiu_Fuqu_13Genus.html +++ b/docs/communities/SynCom_Sesame_Flavor_Baijiu_Fuqu_13Genus.html @@ -1144,14 +1144,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1164,9 +1162,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/SynCom_Y_Agrobacterium_Bacillus_Biofilm_Biocontrol_Coculture.html b/docs/communities/SynCom_Y_Agrobacterium_Bacillus_Biofilm_Biocontrol_Coculture.html index 50c81c867..1e8e1aa92 100644 --- a/docs/communities/SynCom_Y_Agrobacterium_Bacillus_Biofilm_Biocontrol_Coculture.html +++ b/docs/communities/SynCom_Y_Agrobacterium_Bacillus_Biofilm_Biocontrol_Coculture.html @@ -546,7 +546,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -828,14 +828,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -848,9 +846,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Synechococcus_Azotobacter_Photoproduction_Mutualism.html b/docs/communities/Synechococcus_Azotobacter_Photoproduction_Mutualism.html index a72ee0cef..4a890832e 100644 --- a/docs/communities/Synechococcus_Azotobacter_Photoproduction_Mutualism.html +++ b/docs/communities/Synechococcus_Azotobacter_Photoproduction_Mutualism.html @@ -571,7 +571,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1153,14 +1153,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1173,9 +1171,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Synechococcus_Bacillus_SPC.html b/docs/communities/Synechococcus_Bacillus_SPC.html index b79c1d850..a7d045acf 100644 --- a/docs/communities/Synechococcus_Bacillus_SPC.html +++ b/docs/communities/Synechococcus_Bacillus_SPC.html @@ -784,14 +784,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -804,9 +802,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Synechococcus_Ecoli_SPC.html b/docs/communities/Synechococcus_Ecoli_SPC.html index f763fb5b7..b0b8f6ea5 100644 --- a/docs/communities/Synechococcus_Ecoli_SPC.html +++ b/docs/communities/Synechococcus_Ecoli_SPC.html @@ -878,14 +878,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -898,9 +896,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Synechococcus_Halomonas_Light_Driven_PHB_Coculture.html b/docs/communities/Synechococcus_Halomonas_Light_Driven_PHB_Coculture.html index 3eb315a20..8714e0f82 100644 --- a/docs/communities/Synechococcus_Halomonas_Light_Driven_PHB_Coculture.html +++ b/docs/communities/Synechococcus_Halomonas_Light_Driven_PHB_Coculture.html @@ -986,14 +986,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1006,9 +1004,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Synechococcus_Pseudomonas_PhotoPHA_DNT_Coculture.html b/docs/communities/Synechococcus_Pseudomonas_PhotoPHA_DNT_Coculture.html index 9e54e9f04..c49b75f08 100644 --- a/docs/communities/Synechococcus_Pseudomonas_PhotoPHA_DNT_Coculture.html +++ b/docs/communities/Synechococcus_Pseudomonas_PhotoPHA_DNT_Coculture.html @@ -582,7 +582,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1350,14 +1350,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1370,9 +1368,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Synechococcus_Shewanella_Dlactate_Biophotovoltaic_Consortium.html b/docs/communities/Synechococcus_Shewanella_Dlactate_Biophotovoltaic_Consortium.html index ec9e1b441..51873820e 100644 --- a/docs/communities/Synechococcus_Shewanella_Dlactate_Biophotovoltaic_Consortium.html +++ b/docs/communities/Synechococcus_Shewanella_Dlactate_Biophotovoltaic_Consortium.html @@ -1133,14 +1133,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1153,9 +1151,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Synechococcus_Yarrowia_SPC.html b/docs/communities/Synechococcus_Yarrowia_SPC.html index ecb4f5b1a..c32991e63 100644 --- a/docs/communities/Synechococcus_Yarrowia_SPC.html +++ b/docs/communities/Synechococcus_Yarrowia_SPC.html @@ -789,14 +789,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -809,9 +807,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Synthetic_Lichen_Synechococcus_Rhodotorula_Coculture.html b/docs/communities/Synthetic_Lichen_Synechococcus_Rhodotorula_Coculture.html index bdbc68259..8d1dc5ff8 100644 --- a/docs/communities/Synthetic_Lichen_Synechococcus_Rhodotorula_Coculture.html +++ b/docs/communities/Synthetic_Lichen_Synechococcus_Rhodotorula_Coculture.html @@ -551,7 +551,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -952,14 +952,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -972,9 +970,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Synthetic_Periphyton_Freshwater_Biofilm.html b/docs/communities/Synthetic_Periphyton_Freshwater_Biofilm.html index 67a7cc43e..67e7ea85f 100644 --- a/docs/communities/Synthetic_Periphyton_Freshwater_Biofilm.html +++ b/docs/communities/Synthetic_Periphyton_Freshwater_Biofilm.html @@ -776,14 +776,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -796,9 +794,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Syntrophobacter_Methanobacterium_Syntrophy.html b/docs/communities/Syntrophobacter_Methanobacterium_Syntrophy.html index 92d622315..e5e91e7bb 100644 --- a/docs/communities/Syntrophobacter_Methanobacterium_Syntrophy.html +++ b/docs/communities/Syntrophobacter_Methanobacterium_Syntrophy.html @@ -1108,14 +1108,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1128,9 +1126,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Syntrophobacter_Methanospirillum_Syntrophy.html b/docs/communities/Syntrophobacter_Methanospirillum_Syntrophy.html index e5585abb2..f99f6dc72 100644 --- a/docs/communities/Syntrophobacter_Methanospirillum_Syntrophy.html +++ b/docs/communities/Syntrophobacter_Methanospirillum_Syntrophy.html @@ -1266,14 +1266,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1286,9 +1284,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Syntrophomonas_Methanococcus_Butyrate_Growth_Coordination_Coculture.html b/docs/communities/Syntrophomonas_Methanococcus_Butyrate_Growth_Coordination_Coculture.html index 65d368e06..e20235a6b 100644 --- a/docs/communities/Syntrophomonas_Methanococcus_Butyrate_Growth_Coordination_Coculture.html +++ b/docs/communities/Syntrophomonas_Methanococcus_Butyrate_Growth_Coordination_Coculture.html @@ -568,7 +568,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1222,9 +1220,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Syntrophomonas_Methanospirillum_Syntrophy.html b/docs/communities/Syntrophomonas_Methanospirillum_Syntrophy.html index f85032485..ceda710c3 100644 --- a/docs/communities/Syntrophomonas_Methanospirillum_Syntrophy.html +++ b/docs/communities/Syntrophomonas_Methanospirillum_Syntrophy.html @@ -1284,14 +1284,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1304,9 +1302,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Syntrophus_Benzoate_Degrader.html b/docs/communities/Syntrophus_Benzoate_Degrader.html index 5b3050b34..2afec07f8 100644 --- a/docs/communities/Syntrophus_Benzoate_Degrader.html +++ b/docs/communities/Syntrophus_Benzoate_Degrader.html @@ -954,14 +954,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -974,9 +972,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Syntrophus_Methanospirillum_Gentianae_Benzoate_Coculture.html b/docs/communities/Syntrophus_Methanospirillum_Gentianae_Benzoate_Coculture.html index b24a5ab7e..65aa15155 100644 --- a/docs/communities/Syntrophus_Methanospirillum_Gentianae_Benzoate_Coculture.html +++ b/docs/communities/Syntrophus_Methanospirillum_Gentianae_Benzoate_Coculture.html @@ -1223,14 +1223,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1243,9 +1241,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/THOR_Rhizosphere_Model_Community.html b/docs/communities/THOR_Rhizosphere_Model_Community.html index a96e48cc2..aae3056f5 100644 --- a/docs/communities/THOR_Rhizosphere_Model_Community.html +++ b/docs/communities/THOR_Rhizosphere_Model_Community.html @@ -959,14 +959,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -979,9 +977,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/TYQ1_Nematode_Biocontrol_SynCom.html b/docs/communities/TYQ1_Nematode_Biocontrol_SynCom.html index f9606372c..fab9ba3b1 100644 --- a/docs/communities/TYQ1_Nematode_Biocontrol_SynCom.html +++ b/docs/communities/TYQ1_Nematode_Biocontrol_SynCom.html @@ -799,7 +799,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1106,14 +1106,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1126,9 +1124,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Teosinte_Maize_Biofertilizer_SynCom7.html b/docs/communities/Teosinte_Maize_Biofertilizer_SynCom7.html index 9212dd046..728a03344 100644 --- a/docs/communities/Teosinte_Maize_Biofertilizer_SynCom7.html +++ b/docs/communities/Teosinte_Maize_Biofertilizer_SynCom7.html @@ -625,7 +625,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -792,14 +792,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -812,9 +810,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Thalassiosira_Marinobacter_Marine_Snow_Coculture.html b/docs/communities/Thalassiosira_Marinobacter_Marine_Snow_Coculture.html index c91f10db9..7e4096078 100644 --- a/docs/communities/Thalassiosira_Marinobacter_Marine_Snow_Coculture.html +++ b/docs/communities/Thalassiosira_Marinobacter_Marine_Snow_Coculture.html @@ -1108,14 +1108,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1128,9 +1126,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Thalassiosira_Ruegeria_Phycosphere_Coculture.html b/docs/communities/Thalassiosira_Ruegeria_Phycosphere_Coculture.html index d5a17f55c..398334661 100644 --- a/docs/communities/Thalassiosira_Ruegeria_Phycosphere_Coculture.html +++ b/docs/communities/Thalassiosira_Ruegeria_Phycosphere_Coculture.html @@ -1048,14 +1048,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1068,9 +1066,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Thermacetogenium_Methanothermobacter_Acetate_Oxidation_Coculture.html b/docs/communities/Thermacetogenium_Methanothermobacter_Acetate_Oxidation_Coculture.html index 3f2ad0f0b..79929ea28 100644 --- a/docs/communities/Thermacetogenium_Methanothermobacter_Acetate_Oxidation_Coculture.html +++ b/docs/communities/Thermacetogenium_Methanothermobacter_Acetate_Oxidation_Coculture.html @@ -1356,14 +1356,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1376,9 +1374,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Thermophilic_Lignocellulose_Composting_SynCom_Biosanitization.html b/docs/communities/Thermophilic_Lignocellulose_Composting_SynCom_Biosanitization.html index 17ca7e419..8f3d076a5 100644 --- a/docs/communities/Thermophilic_Lignocellulose_Composting_SynCom_Biosanitization.html +++ b/docs/communities/Thermophilic_Lignocellulose_Composting_SynCom_Biosanitization.html @@ -857,14 +857,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -877,9 +875,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Thermophilic_Pyrite_QS_Consortium.html b/docs/communities/Thermophilic_Pyrite_QS_Consortium.html index 420b28ce3..7990e2aaf 100644 --- a/docs/communities/Thermophilic_Pyrite_QS_Consortium.html +++ b/docs/communities/Thermophilic_Pyrite_QS_Consortium.html @@ -681,7 +681,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1656,14 +1656,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1676,9 +1674,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Thermotoga_Methanocaldococcus_Hyperthermophilic_Syntrophy.html b/docs/communities/Thermotoga_Methanocaldococcus_Hyperthermophilic_Syntrophy.html index 39e19c9bf..0f82f6050 100644 --- a/docs/communities/Thermotoga_Methanocaldococcus_Hyperthermophilic_Syntrophy.html +++ b/docs/communities/Thermotoga_Methanocaldococcus_Hyperthermophilic_Syntrophy.html @@ -1145,14 +1145,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1165,9 +1163,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Thiocyanate_Afipia_Thiobacillus_Bioreactor_Community.html b/docs/communities/Thiocyanate_Afipia_Thiobacillus_Bioreactor_Community.html index 22c2283ee..7252bf0ce 100644 --- a/docs/communities/Thiocyanate_Afipia_Thiobacillus_Bioreactor_Community.html +++ b/docs/communities/Thiocyanate_Afipia_Thiobacillus_Bioreactor_Community.html @@ -923,14 +923,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -943,9 +941,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Tinto_River_Iron_Cycling_Community.html b/docs/communities/Tinto_River_Iron_Cycling_Community.html index b55f43bcb..64ebc4016 100644 --- a/docs/communities/Tinto_River_Iron_Cycling_Community.html +++ b/docs/communities/Tinto_River_Iron_Cycling_Community.html @@ -728,7 +728,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1166,14 +1166,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1186,9 +1184,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Tobacco_Chemotactic_Biocontrol_SynCom.html b/docs/communities/Tobacco_Chemotactic_Biocontrol_SynCom.html index 6b50958fa..f01b6a84a 100644 --- a/docs/communities/Tobacco_Chemotactic_Biocontrol_SynCom.html +++ b/docs/communities/Tobacco_Chemotactic_Biocontrol_SynCom.html @@ -708,14 +708,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -728,9 +726,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Tomato_Oxylipin_SynCom3.html b/docs/communities/Tomato_Oxylipin_SynCom3.html index 4c5652fe2..bd45adebd 100644 --- a/docs/communities/Tomato_Oxylipin_SynCom3.html +++ b/docs/communities/Tomato_Oxylipin_SynCom3.html @@ -583,7 +583,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -695,14 +695,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -715,9 +713,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Tribromophenol_Anaerobic_Bioremediation_SynCom.html b/docs/communities/Tribromophenol_Anaerobic_Bioremediation_SynCom.html index 0f70f2a2d..f74820536 100644 --- a/docs/communities/Tribromophenol_Anaerobic_Bioremediation_SynCom.html +++ b/docs/communities/Tribromophenol_Anaerobic_Bioremediation_SynCom.html @@ -763,14 +763,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -783,9 +781,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Trichococcus_Syntrophomonas_Methanospirillum_Butyrate_Coculture.html b/docs/communities/Trichococcus_Syntrophomonas_Methanospirillum_Butyrate_Coculture.html index 3ab0cfb71..3ba2f399f 100644 --- a/docs/communities/Trichococcus_Syntrophomonas_Methanospirillum_Butyrate_Coculture.html +++ b/docs/communities/Trichococcus_Syntrophomonas_Methanospirillum_Butyrate_Coculture.html @@ -1306,14 +1306,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1326,9 +1324,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Trichoderma_Ecoli_Cellulosic_Isobutanol_Coculture.html b/docs/communities/Trichoderma_Ecoli_Cellulosic_Isobutanol_Coculture.html index 0003a5f13..4ea0a21eb 100644 --- a/docs/communities/Trichoderma_Ecoli_Cellulosic_Isobutanol_Coculture.html +++ b/docs/communities/Trichoderma_Ecoli_Cellulosic_Isobutanol_Coculture.html @@ -1118,14 +1118,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1138,9 +1136,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Trichoderma_Lactate_Platform.html b/docs/communities/Trichoderma_Lactate_Platform.html index e87ceb887..6809d567e 100644 --- a/docs/communities/Trichoderma_Lactate_Platform.html +++ b/docs/communities/Trichoderma_Lactate_Platform.html @@ -973,14 +973,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -993,9 +991,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Trichoderma_Streptomyces_Filamentous_Cellulose_Coculture.html b/docs/communities/Trichoderma_Streptomyces_Filamentous_Cellulose_Coculture.html index 2220020da..48af45cca 100644 --- a/docs/communities/Trichoderma_Streptomyces_Filamentous_Cellulose_Coculture.html +++ b/docs/communities/Trichoderma_Streptomyces_Filamentous_Cellulose_Coculture.html @@ -1087,14 +1087,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1107,9 +1105,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Trichodesmium_Alteromonas_Marine_Consortium.html b/docs/communities/Trichodesmium_Alteromonas_Marine_Consortium.html index 4e210d3b5..2bba4eafa 100644 --- a/docs/communities/Trichodesmium_Alteromonas_Marine_Consortium.html +++ b/docs/communities/Trichodesmium_Alteromonas_Marine_Consortium.html @@ -591,7 +591,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1009,9 +1007,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Urine_Nitrification_SynCom.html b/docs/communities/Urine_Nitrification_SynCom.html index e581bb55c..787d6eb71 100644 --- a/docs/communities/Urine_Nitrification_SynCom.html +++ b/docs/communities/Urine_Nitrification_SynCom.html @@ -842,14 +842,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -862,9 +860,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Variovorax_Cryptococcus_Vitamin_Mutualism_Microcosm.html b/docs/communities/Variovorax_Cryptococcus_Vitamin_Mutualism_Microcosm.html index 0b8ddab7d..4499d7eaa 100644 --- a/docs/communities/Variovorax_Cryptococcus_Vitamin_Mutualism_Microcosm.html +++ b/docs/communities/Variovorax_Cryptococcus_Vitamin_Mutualism_Microcosm.html @@ -562,7 +562,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -977,14 +977,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -997,9 +995,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Watermelon_Rhizosphere_Fusarium_SynCom8.html b/docs/communities/Watermelon_Rhizosphere_Fusarium_SynCom8.html index 473b8f2d0..d462ab3b3 100644 --- a/docs/communities/Watermelon_Rhizosphere_Fusarium_SynCom8.html +++ b/docs/communities/Watermelon_Rhizosphere_Fusarium_SynCom8.html @@ -541,7 +541,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -747,14 +747,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -767,9 +765,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Wetland_Oxygen_Sulfate_GHG_Microcosm_Community.html b/docs/communities/Wetland_Oxygen_Sulfate_GHG_Microcosm_Community.html index 077881099..6bec6359b 100644 --- a/docs/communities/Wetland_Oxygen_Sulfate_GHG_Microcosm_Community.html +++ b/docs/communities/Wetland_Oxygen_Sulfate_GHG_Microcosm_Community.html @@ -1152,14 +1152,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1172,9 +1170,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Wheat_Consortium_C1.html b/docs/communities/Wheat_Consortium_C1.html index 712232f35..33951662f 100644 --- a/docs/communities/Wheat_Consortium_C1.html +++ b/docs/communities/Wheat_Consortium_C1.html @@ -584,7 +584,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -838,14 +838,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -858,9 +856,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Wheat_Consortium_C6.html b/docs/communities/Wheat_Consortium_C6.html index 178c8db94..caa1205a3 100644 --- a/docs/communities/Wheat_Consortium_C6.html +++ b/docs/communities/Wheat_Consortium_C6.html @@ -584,7 +584,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -871,9 +869,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Wheat_Straw_Biogas_Pretreatment_SynCom.html b/docs/communities/Wheat_Straw_Biogas_Pretreatment_SynCom.html index 6f197f20d..f71c06ab3 100644 --- a/docs/communities/Wheat_Straw_Biogas_Pretreatment_SynCom.html +++ b/docs/communities/Wheat_Straw_Biogas_Pretreatment_SynCom.html @@ -640,7 +640,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -752,14 +752,12 @@

Environmental Factors

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -772,9 +770,7 @@

Environmental Factors

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Yogurt_TwoSpecies_Starter_Culture.html b/docs/communities/Yogurt_TwoSpecies_Starter_Culture.html index 2c54569bf..4aedb023c 100644 --- a/docs/communities/Yogurt_TwoSpecies_Starter_Culture.html +++ b/docs/communities/Yogurt_TwoSpecies_Starter_Culture.html @@ -588,7 +588,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
Evidence (function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1274,9 +1272,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/Zymomonas_Ecoli_Exometabolomics_Obligate_Mutualism.html b/docs/communities/Zymomonas_Ecoli_Exometabolomics_Obligate_Mutualism.html index d30380239..ae5dacc96 100644 --- a/docs/communities/Zymomonas_Ecoli_Exometabolomics_Obligate_Mutualism.html +++ b/docs/communities/Zymomonas_Ecoli_Exometabolomics_Obligate_Mutualism.html @@ -569,7 +569,7 @@

Ecological Interactions

Mutualism + data-color="#9f2ebb"> Mutualism
@@ -1077,14 +1077,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1097,9 +1095,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/hCom2_Complex_Gut_Microbiome.html b/docs/communities/hCom2_Complex_Gut_Microbiome.html index f8bed30a4..a84a5debf 100644 --- a/docs/communities/hCom2_Complex_Gut_Microbiome.html +++ b/docs/communities/hCom2_Complex_Gut_Microbiome.html @@ -705,14 +705,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -725,9 +723,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/docs/communities/mCAFEs_Brachypodium_RCC.html b/docs/communities/mCAFEs_Brachypodium_RCC.html index affd4f6e2..9d059b919 100644 --- a/docs/communities/mCAFEs_Brachypodium_RCC.html +++ b/docs/communities/mCAFEs_Brachypodium_RCC.html @@ -1178,14 +1178,12 @@

Evidence

(function() { var interactionColors = { "CROSS_FEEDING": "#57c7ab", - "MUTUALISM": "#56bbe6", + "MUTUALISM": "#9f2ebb", "SYNTROPHY": "#7f30cf", "COMPETITION": "#a91919", "COMMENSALISM": "#cf7830", "NICHE_PARTITIONING": "#1212ed", - "COLONIZATION_FACILITATION": "#edab12", - "STRAIN_COMPETITION": "#cf30b7", - "PREDATION": "#913079" + "COLONIZATION_FACILITATION": "#edab12" }; var unmappedColor = "#929caa"; @@ -1198,9 +1196,7 @@

Evidence

"COMPETITION": "symbolTimes", "COMMENSALISM": "symbolWye", "NICHE_PARTITIONING": "symbolSquare2", - "COLONIZATION_FACILITATION": "symbolPlus", - "STRAIN_COMPETITION": "symbolAsterisk", - "PREDATION": "symbolStar" + "COLONIZATION_FACILITATION": "symbolPlus" }; var unmappedSymbol = "symbolTriangle2"; diff --git a/src/communitymech/templates/community.html b/src/communitymech/templates/community.html index dda440069..abf9278ef 100644 --- a/src/communitymech/templates/community.html +++ b/src/communitymech/templates/community.html @@ -541,14 +541,12 @@

Taxonomy

and `tests/test_network_palette.py` must BOTH pass. -#} {%- set interaction_legend = [ {"key": "CROSS_FEEDING", "label": "Cross-feeding", "color": "#57c7ab", "symbol": "symbolDiamond"}, - {"key": "MUTUALISM", "label": "Mutualism", "color": "#56bbe6", "symbol": "symbolSquare"}, + {"key": "MUTUALISM", "label": "Mutualism", "color": "#9f2ebb", "symbol": "symbolSquare"}, {"key": "SYNTROPHY", "label": "Syntrophy", "color": "#7f30cf", "symbol": "symbolTriangle"}, {"key": "COMPETITION", "label": "Competition", "color": "#a91919", "symbol": "symbolTimes"}, {"key": "COMMENSALISM", "label": "Commensalism", "color": "#cf7830", "symbol": "symbolWye"}, {"key": "NICHE_PARTITIONING", "label": "Niche partitioning", "color": "#1212ed", "symbol": "symbolSquare2"}, - {"key": "COLONIZATION_FACILITATION", "label": "Colonization facilitation", "color": "#edab12", "symbol": "symbolPlus"}, - {"key": "STRAIN_COMPETITION", "label": "Strain competition", "color": "#cf30b7", "symbol": "symbolAsterisk"}, - {"key": "PREDATION", "label": "Predation", "color": "#913079", "symbol": "symbolStar"} + {"key": "COLONIZATION_FACILITATION", "label": "Colonization facilitation", "color": "#edab12", "symbol": "symbolPlus"} ] -%} {%- set unmapped_symbol = "symbolTriangle2" -%} {#- Mirror the script's `interaction_type or "UNKNOWN"` so a typeless diff --git a/tests/test_network_palette.py b/tests/test_network_palette.py index 2f8234536..e54fbd712 100644 --- a/tests/test_network_palette.py +++ b/tests/test_network_palette.py @@ -33,6 +33,7 @@ import itertools import math import re +from collections import Counter from pathlib import Path import pytest @@ -46,9 +47,29 @@ # replaced measured 0.0 (taxon and MUTUALISM were the same hex). MIN_SEPARATION = 15.0 -# Enum whose permissible values the palette must cover exactly. +# Enum whose permissible values the palette must cover, apart from FOLDED. INTERACTION_ENUM = "InteractionTypeEnum" +# Types deliberately drawn with the grey "Other" swatch rather than a hue of +# their own (#532). Nine colours cannot be separated under protan, deutan AND +# tritan at once — the comment on `test_tritan_collisions_are_documented` said +# so, and the palette shipped with four tritan collisions as the price. Seven +# can: dropping these two frees the magenta region, which is where MUTUALISM had +# to move to stop colliding with CROSS_FEEDING under tritanopia. +# +# Chosen on usage, not aesthetics, and the counts are re-checked by +# `test_folded_types_are_still_the_rare_ones` so this cannot quietly become +# wrong as the KB grows. +FOLDED = { + "STRAIN_COMPETITION": "1 occurrence in the KB", + "PREDATION": "11 occurrences; the next-rarest coloured type has 67", +} + +# No coloured type may be rarer than a folded one by more than this factor — +# the justification is "these two are far rarer than everything else", and that +# claim has to keep holding. +FOLD_HEADROOM = 2 + # -------------------------------------------------------------------------- # Extracting the palette from the template @@ -166,11 +187,18 @@ def test_palette_covers_the_interaction_enum_exactly(): than failing, so only this comparison catches a newly added enum value. """ palette, enum = set(_palette()), _enum_values() - assert not (enum - palette), ( + uncoloured = enum - palette - set(FOLDED) + assert not uncoloured, ( f"{INTERACTION_ENUM} values with no colour in {TEMPLATE.name}: " - f"{sorted(enum - palette)}. They would render as a grey 'Other' swatch " + f"{sorted(uncoloured)}. They would render as a grey 'Other' swatch " f"on every page instead of failing. Add them to `interaction_legend` " - f"and rerun this module to confirm separation still holds." + f"and rerun this module to confirm separation still holds — or, if they " + f"are genuinely too rare to earn a hue, add them to FOLDED with a count." + ) + stale_folds = set(FOLDED) - enum + assert not stale_folds, ( + f"FOLDED names values not in {INTERACTION_ENUM}: {sorted(stale_folds)}. " + f"Remove them, or restore the enum value." ) assert not (palette - enum), ( f"colours in {TEMPLATE.name} for values not in {INTERACTION_ENUM}: " @@ -256,9 +284,21 @@ def test_tritan_collisions_are_documented(): for a, b in itertools.combinations(swatches, 2) if _delta_e(swatches[a], swatches[b], "tritan") < MIN_SEPARATION ) - assert len(collisions) <= 4, ( + # Ratcheted from 4 to 1 by #532. Folding the two rarest types freed the + # magenta region, MUTUALISM moved into it, and CROSS_FEEDING/MUTUALISM went + # from ΔE 1.8 to 68.4 under tritanopia. The single survivor is + # SYNTROPHY/_taxon, which shape already separates — taxa are circles and + # every interaction is a non-circular symbol (#270). + between_types = [c for c in collisions if not (c[1].startswith("_") or c[2].startswith("_"))] + assert between_types == [], ( + f"two interaction types collide under tritanopia: {between_types}. " + f"Since #532 the coloured types are separable under normal, protan, " + f"deutan AND tritan; do not trade that away." + ) + assert len(collisions) <= 1, ( f"tritanopia collisions grew to {len(collisions)} pairs: {collisions}. " - f"The palette shipped with 4; a retune should not make this worse." + f"The palette ships with 1 (a type against the grey taxon node, which " + f"shape distinguishes); a retune should not make this worse." ) @@ -275,3 +315,33 @@ def test_hues_are_spread_around_the_wheel(): f"two interaction hues are only {min(gaps):.1f}° apart (hues: " f"{[round(h) for h in hues]}); colours this close read as one family." ) + + +def test_folded_types_are_still_the_rare_ones(): + """The fold is justified by usage, so the usage claim must keep holding (#532). + + `FOLDED` drops two interaction types to the grey "Other" swatch because they + are far rarer than everything else — 1 and 11 occurrences against a + next-rarest coloured type of 67. That is a fact about today's KB, not a + property of the enum, and curation moves. If a folded type becomes common, + the reasoning has inverted and somebody should look rather than discover it + in a figure. + """ + counts = Counter() + for path in sorted((Path(__file__).parent.parent / "kb/communities").glob("*.yaml")): + for match in re.finditer( + r"interaction_type:\s*([A-Z_]+)", path.read_text(encoding="utf-8") + ): + counts[match.group(1)] += 1 + + assert counts, "no interaction types found; the scan is broken" + + rarest_coloured = min(counts.get(key, 0) for key in _palette()) + for folded in FOLDED: + assert counts.get(folded, 0) * FOLD_HEADROOM <= rarest_coloured, ( + f"{folded} is folded into the grey 'Other' swatch as too rare to " + f"earn a hue, but it now has {counts.get(folded, 0)} occurrences " + f"against a rarest-coloured-type count of {rarest_coloured}. Give it " + f"a colour and re-run the separation tests, or widen FOLD_HEADROOM " + f"deliberately." + ) From b47d3ea6a93a211c71193739a981fece1d2a9fe4 Mon Sep 17 00:00:00 2001 From: "marcin p. joachimiak" <4625870+realmarcin@users.noreply.github.com> Date: Fri, 14 Aug 2026 22:05:41 -0700 Subject: [PATCH 2/3] Hold the UMAP palette to the same floor as the network one (#601, #602) MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit #199's checklist records the UMAP page's colours as "CVD-safe 8 + grey Other". Measured with this repo's own colour code, they were not: normal 22.0 (0 pairs below 15) protan 6.9 (4) <- LIGNOCELLULOSE/METHANOGENESIS, red/green convergence deutan 10.4 (3) <- incl. BIOTECHNOLOGY against the collapsed grey tritan 5.8 (3) The network palette has been gated at delta-E >= 15 for normal/protan/deutan since #269. The UMAP palette was hand-picked, asserted CVD-safe, and read by no test — the same shape as #588, a rule applied to one artefact and not its sibling. Re-stepped, keeping every hue's semantic assignment (blue rhizosphere, green lignocellulose, red methanogenesis) and separating on lightness instead, which is what red/green convergence under protanopia actually requires: normal 31.1 (0) protan 16.0 (0) deutan 16.7 (0) tritan 11.0 (4) Every gated metric improves. Tritan has one more pair under 15 than before but its WORST pair nearly doubles, 5.8 -> 11.0: no two categories are now indistinguishable, which matters more than the count. Chosen over a variant scoring 17.4 on the gated metrics precisely because that one dropped tritan's worst pair to 2.2. Both palettes are now gated by one module. The parser is scoped to `categoryColors`; a first version matched every hex in the file and dragged in `stateColors`/`originColors`, which belong to other colour-by modes and are never on screen together — it invented three failures. #602: check-docs-current ran only `gen-html`, so docs/community_umap.html could drift from its template forever while the gate stayed green — demonstrated by this very change, where the template had the new colours and the published page still served the old ones after a green run. `gen-umap` now runs there too; the embedding is seeded, so two runs are byte-identical and this cannot flake. Mutations checked: restoring the old palette reddens protan and deutan; breaking the parser reddens the shape guard rather than passing silently. Co-Authored-By: Claude Opus 5 --- docs/community_umap.html | 24 +++--- justfile | 9 +++ .../templates/community_umap.html | 24 +++--- tests/test_network_palette.py | 74 +++++++++++++++++++ 4 files changed, 113 insertions(+), 18 deletions(-) diff --git a/docs/community_umap.html b/docs/community_umap.html index dc2d2a2c3..9aee0cda9 100644 --- a/docs/community_umap.html +++ b/docs/community_umap.html @@ -5003,18 +5003,24 @@

How to Interpret This Visualization

const margin = { top: 20, right: 20, bottom: 40, left: 40 }; // Color schemes for different attributes with semantic, non-clashing colors - // Categorical 8 (CVD-safe, ordered by frequency) + Other (grey). + // Categorical 8 + Other (grey). Re-stepped in #601 so the set clears the + // same floor tests/test_network_palette.py holds the network palette to: + // delta-E >= 15 under normal, protan AND deutan vision. The previous set + // was described as CVD-safe but measured 6.9 under protanopia + // (LIGNOCELLULOSE/METHANOGENESIS - the classic red/green convergence). + // Hues keep their semantic assignment; separation comes from lightness. + // Do not retune by eye or one colour at a time. // The 8 most frequent categories get a distinct colour; the rest // (and OTHER) collapse to grey. Order is the colourblind-safety mechanism. const categoryColors = { - 'RHIZOSPHERE': '#2a78d6', // blue - 'BIOTECHNOLOGY': '#1baf7a', // aqua - 'BIOREMEDIATION': '#eda100', // yellow - 'LIGNOCELLULOSE': '#008300', // green - 'SYNTROPHY': '#4a3aa7', // violet - 'METHANOGENESIS': '#e34948', // red - 'PHYTOPLANKTON': '#e87ba4', // magenta - 'CARBON_SEQUESTRATION': '#eb6834', // orange + 'RHIZOSPHERE': '#3169e1', // blue + 'BIOTECHNOLOGY': '#6bc6bf', // aqua + 'BIOREMEDIATION': '#f2a011', // amber + 'LIGNOCELLULOSE': '#49ba6f', // green + 'SYNTROPHY': '#5511f2', // violet + 'METHANOGENESIS': '#cb0d0a', // red + 'PHYTOPLANKTON': '#9f086f', // magenta + 'CARBON_SEQUESTRATION': '#e3703f', // orange 'OTHER': '#898781', // grey - collapsed 'EXTREME_ENVIRONMENT': '#898781', // grey - collapsed 'BIOMINING': '#898781', // grey - collapsed diff --git a/justfile b/justfile index e41a2afa6..1063e5645 100644 --- a/justfile +++ b/justfile @@ -342,6 +342,15 @@ check-docs-current: # this gate reported it current, green in exactly the case where the # regeneration it gates on had not happened (#442 review). just gen-html + # EVERY generator whose output is committed under docs/ must run here. Not + # just gen-html: docs/community_umap.html comes from `gen-umap`, which this + # gate did not run, so that page could drift from its template forever and + # the gate stayed green because nothing regenerated it to produce a diff + # (#602 — a palette re-step reached the template and not the page). Safe to + # run: the embedding is seeded, so two runs are byte-identical. Adding a + # generator without adding it here is the omission this comment exists to + # make visible. + just gen-umap # An orphan: a page whose record was renamed or deleted. gen-html only ever # writes, so the stale page stays tracked and published while the diff stays # empty. f8d85b1 is a rename of exactly that shape. diff --git a/src/communitymech/templates/community_umap.html b/src/communitymech/templates/community_umap.html index 04086ef87..a9d9a7a70 100644 --- a/src/communitymech/templates/community_umap.html +++ b/src/communitymech/templates/community_umap.html @@ -676,18 +676,24 @@

How to Interpret This Visualization

const margin = { top: 20, right: 20, bottom: 40, left: 40 }; // Color schemes for different attributes with semantic, non-clashing colors - // Categorical 8 (CVD-safe, ordered by frequency) + Other (grey). + // Categorical 8 + Other (grey). Re-stepped in #601 so the set clears the + // same floor tests/test_network_palette.py holds the network palette to: + // delta-E >= 15 under normal, protan AND deutan vision. The previous set + // was described as CVD-safe but measured 6.9 under protanopia + // (LIGNOCELLULOSE/METHANOGENESIS - the classic red/green convergence). + // Hues keep their semantic assignment; separation comes from lightness. + // Do not retune by eye or one colour at a time. // The 8 most frequent categories get a distinct colour; the rest // (and OTHER) collapse to grey. Order is the colourblind-safety mechanism. const categoryColors = { - 'RHIZOSPHERE': '#2a78d6', // blue - 'BIOTECHNOLOGY': '#1baf7a', // aqua - 'BIOREMEDIATION': '#eda100', // yellow - 'LIGNOCELLULOSE': '#008300', // green - 'SYNTROPHY': '#4a3aa7', // violet - 'METHANOGENESIS': '#e34948', // red - 'PHYTOPLANKTON': '#e87ba4', // magenta - 'CARBON_SEQUESTRATION': '#eb6834', // orange + 'RHIZOSPHERE': '#3169e1', // blue + 'BIOTECHNOLOGY': '#6bc6bf', // aqua + 'BIOREMEDIATION': '#f2a011', // amber + 'LIGNOCELLULOSE': '#49ba6f', // green + 'SYNTROPHY': '#5511f2', // violet + 'METHANOGENESIS': '#cb0d0a', // red + 'PHYTOPLANKTON': '#9f086f', // magenta + 'CARBON_SEQUESTRATION': '#e3703f', // orange 'OTHER': '#898781', // grey - collapsed 'EXTREME_ENVIRONMENT': '#898781', // grey - collapsed 'BIOMINING': '#898781', // grey - collapsed diff --git a/tests/test_network_palette.py b/tests/test_network_palette.py index e54fbd712..0531ac8ee 100644 --- a/tests/test_network_palette.py +++ b/tests/test_network_palette.py @@ -345,3 +345,77 @@ def test_folded_types_are_still_the_rare_ones(): f"a colour and re-run the separation tests, or widen FOLD_HEADROOM " f"deliberately." ) + + +# -------------------------------------------------------------------------- +# The UMAP page's category palette (#601) +# -------------------------------------------------------------------------- + +UMAP_TEMPLATE = Path(__file__).parent.parent / "src/communitymech/templates/community_umap.html" + + +def _umap_palette() -> dict[str, str]: + """The category → colour map on the UMAP page, minus the collapsed greys. + + Parsed from the template rather than duplicated here, for the same reason + `_palette()` is: a copy in the test would keep passing after the page + changed. Entries sharing the grey are the deliberately collapsed + categories — they are one visual class, so they are folded to a single + `_other` swatch rather than compared against each other. + """ + text = UMAP_TEMPLATE.read_text() + # Scoped to `categoryColors` deliberately. The page defines several + # independent schemes (`stateColors`, `originColors`) for other colour-by + # modes; they are never on screen together, so comparing across them would + # invent failures — a first version of this parser did exactly that. + block = re.search(r"const\s+categoryColors\s*=\s*\{(.*?)\};", text, re.DOTALL) + assert block, f"categoryColors not found in {UMAP_TEMPLATE.name} — did it move?" + pairs = re.findall(r"'([A-Z_]+)':\s*'(#[0-9a-fA-F]{6})'", block.group(1)) + assert pairs, f"no category colours parsed from {UMAP_TEMPLATE.name}" + by_key = dict(pairs) + grey = Counter(by_key.values()).most_common(1)[0][0] + palette = {k: v for k, v in by_key.items() if v != grey} + palette["_other"] = grey + return palette + + +@pytest.mark.parametrize("kind", [None, "protan", "deutan"]) +def test_umap_categories_stay_separated_under_colour_vision_deficiency(kind): + """One standard for both palettes (#601). + + The network palette has been gated at MIN_SEPARATION since #269; the UMAP + page's palette was hand-picked, described as "CVD-safe 8" in #199, and read + by no test. Measured, it sat at ΔE 6.9 under protanopia — + LIGNOCELLULOSE/METHANOGENESIS, the classic red/green convergence — and + BIOTECHNOLOGY collided with the collapsed grey at 10.4 under deuteranopia. + + Same defect shape as #588: a rule applied to one artefact and not its + sibling. + """ + palette = _umap_palette() + worst = min( + ( + (_delta_e(palette[a], palette[b], kind), a, b) + for a, b in itertools.combinations(palette, 2) + ), + key=lambda row: row[0], + ) + distance, first, second = worst + assert distance >= MIN_SEPARATION, ( + f"UMAP categories {first} ({palette[first]}) and {second} " + f"({palette[second]}) are only ΔE {distance:.1f} apart under " + f"{kind or 'normal'} vision, below the {MIN_SEPARATION} floor. " + f"Re-step them together rather than lowering the floor — hues carry " + f"semantic meaning here, so separate on lightness." + ) + + +def test_umap_palette_has_the_expected_shape(): + """Guard: an empty or half-parsed palette passes the separation test. + + `_umap_palette` reads a JS object literal out of an HTML template, which is + exactly the kind of extraction that silently returns `{}` after a refactor. + """ + palette = _umap_palette() + assert len(palette) >= 8, f"only {len(palette)} UMAP categories parsed: {sorted(palette)}" + assert "_other" in palette, "the collapsed-category grey was not identified" From 70647f444a63e4cf62858443dd0873d963e141fa Mon Sep 17 00:00:00 2001 From: "marcin p. joachimiak" <4625870+realmarcin@users.noreply.github.com> Date: Fri, 14 Aug 2026 22:15:51 -0700 Subject: [PATCH 3/3] Gate the published UMAP page by comparison, not regeneration (#602) MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit CI rejected the first fix, correctly. `gen-umap` needs data/embeddings/DeepWalkSkipGramEnsmallen_*.tsv.gz — a large local artefact that is not in the repo — so adding it to check-docs-current failed the gate outright: Error: Invalid value for '--embeddings-path': File '...tsv.gz' does not exist That absence is presumably why the recipe was excluded in the first place, which I should have checked before proposing to add it. My local determinism check proved the embedding is seeded; it did not prove the input exists anywhere but this machine. The drift is still real and still worth gating, so it is gated a different way: compare the category colours in docs/community_umap.html against the ones in the template. That needs no embeddings, so it runs where regeneration cannot, and it checks the property that actually matters — what a reader is served — rather than the process that produces it. The justfile now records why gen-umap is deliberately absent, so the next person does not repeat the same reasoning and the same CI failure. Co-Authored-By: Claude Opus 5 --- justfile | 16 +++++++--------- tests/test_network_palette.py | 36 +++++++++++++++++++++++++++++++++++ 2 files changed, 43 insertions(+), 9 deletions(-) diff --git a/justfile b/justfile index 1063e5645..634b3e470 100644 --- a/justfile +++ b/justfile @@ -342,15 +342,13 @@ check-docs-current: # this gate reported it current, green in exactly the case where the # regeneration it gates on had not happened (#442 review). just gen-html - # EVERY generator whose output is committed under docs/ must run here. Not - # just gen-html: docs/community_umap.html comes from `gen-umap`, which this - # gate did not run, so that page could drift from its template forever and - # the gate stayed green because nothing regenerated it to produce a diff - # (#602 — a palette re-step reached the template and not the page). Safe to - # run: the embedding is seeded, so two runs are byte-identical. Adding a - # generator without adding it here is the omission this comment exists to - # make visible. - just gen-umap + # NOT `just gen-umap`, though docs/community_umap.html is also committed + # here. That recipe needs data/embeddings/*.tsv.gz, which is a large local + # artefact absent from CI, so running it here fails the gate outright + # (#602). The drift it would have caught — a template edit that never + # reaches the published page — is gated instead by + # tests/test_network_palette.py::test_published_umap_page_matches_the_template, + # which compares the two without regenerating anything. # An orphan: a page whose record was renamed or deleted. gen-html only ever # writes, so the stale page stays tracked and published while the diff stays # empty. f8d85b1 is a rename of exactly that shape. diff --git a/tests/test_network_palette.py b/tests/test_network_palette.py index 0531ac8ee..6fced8397 100644 --- a/tests/test_network_palette.py +++ b/tests/test_network_palette.py @@ -419,3 +419,39 @@ def test_umap_palette_has_the_expected_shape(): palette = _umap_palette() assert len(palette) >= 8, f"only {len(palette)} UMAP categories parsed: {sorted(palette)}" assert "_other" in palette, "the collapsed-category grey was not identified" + + +def test_published_umap_page_matches_the_template(): + """The published UMAP page must carry the template's colours (#602). + + `check-docs-current` regenerates and diffs `docs/`, but only via `gen-html`. + `docs/community_umap.html` comes from `gen-umap`, which needs a large + embeddings artefact that CI does not have — so that recipe cannot run in the + gate, and the page could drift from its template indefinitely with nothing + to notice. Caught for real while re-stepping the palette in #601: the + template had the new colours, `gen-html` ran clean, the gate said + "✅ docs/ matches the KB", and the published page still served the old ones. + + Comparing the two files needs no embeddings, so it works where regeneration + does not. It checks the property that actually matters — what a reader is + served — rather than the process that produces it. + """ + published = Path(__file__).parent.parent / "docs/community_umap.html" + if not published.is_file(): + pytest.skip("docs/community_umap.html is not built in this checkout") + + def categories(text: str) -> dict[str, str]: + block = re.search(r"const\s+categoryColors\s*=\s*\{(.*?)\};", text, re.DOTALL) + assert block, "categoryColors not found" + return dict(re.findall(r"'([A-Z_]+)':\s*'(#[0-9a-fA-F]{6})'", block.group(1))) + + in_template = categories(UMAP_TEMPLATE.read_text()) + on_page = categories(published.read_text()) + + drifted = {k: (v, on_page.get(k)) for k, v in in_template.items() if on_page.get(k) != v} + assert not drifted, ( + "docs/community_umap.html does not carry the template's category " + "colours — a template edit that never reached the published page " + f"(#602). template vs published: {drifted}. Run `just gen-umap` and " + "commit the result." + )