From f518e0d779f8c4ea9b0a1b730a451f1b053e3456 Mon Sep 17 00:00:00 2001 From: hejamu Date: Fri, 6 Nov 2026 13:34:44 +0100 Subject: [PATCH] Update GitHub URLs for org rename to atomistic-lab --- .../ISSUE_TEMPLATE/2-documentation_issue.yml | 2 +- CHANGELOG.rst | 1 + CONTRIBUTING.rst | 6 +++--- README.rst | 18 +++++++++--------- docs/src/analysis-modules/index.rst | 2 +- pyproject.toml | 6 +++--- tox.ini | 2 +- 7 files changed, 19 insertions(+), 18 deletions(-) diff --git a/.github/ISSUE_TEMPLATE/2-documentation_issue.yml b/.github/ISSUE_TEMPLATE/2-documentation_issue.yml index 9a5f8f4..054b8e3 100644 --- a/.github/ISSUE_TEMPLATE/2-documentation_issue.yml +++ b/.github/ISSUE_TEMPLATE/2-documentation_issue.yml @@ -13,7 +13,7 @@ body: label: Location of the issue description: | Provide the location of the documentation issue. This could be a URL, file path, or section heading. - placeholder: e.g., https://maicos-devel.github.io/spectrumkit/stable/get-started/installation.html or "Getting started -> Installation" + placeholder: e.g., https://atomistic-lab.github.io/spectrumkit/stable/get-started/installation.html or "Getting started -> Installation" validations: required: true - type: textarea diff --git a/CHANGELOG.rst b/CHANGELOG.rst index 9e72ff2..b5d3f67 100644 --- a/CHANGELOG.rst +++ b/CHANGELOG.rst @@ -14,6 +14,7 @@ The rules for spectrumkit's CHANGELOG file: Unreleased ---------- +- Update GitHub URLs for the org rename ``maicos-devel`` -> ``atomistic-lab``. - Fix logarithmic binning with ``binafter=0`` (#23). - Require ``maicos>=0.13``, drop the ``mdacli<=0.1.35`` pin. (#20) diff --git a/CONTRIBUTING.rst b/CONTRIBUTING.rst index fb49a2b..01db4d4 100644 --- a/CONTRIBUTING.rst +++ b/CONTRIBUTING.rst @@ -39,7 +39,7 @@ reported to the `project maintainers`_. This Code of Conduct is adapted from the `Contributor Covenant`_, version 1.1.0, available at https://contributor-covenant.org/version/1/1/0/ -.. _`project maintainers` : https://github.com/maicos-devel/spectrumkit/blob/main/AUTHORS.rst +.. _`project maintainers` : https://github.com/atomistic-lab/spectrumkit/blob/main/AUTHORS.rst .. _`Contributor Covenant` : https://contributor-covenant.org Getting involved @@ -49,7 +49,7 @@ Contribution via pull requests are always welcome. Source code is available from `GitHub`_. Before submitting a pull request, please open an issue to discuss your changes. Use only the ``main`` branch for submitting your requests. -.. _`GitHub` : https://github.com/maicos-devel/spectrumkit/ +.. _`GitHub` : https://github.com/atomistic-lab/spectrumkit/ By contributing to Spectrumkit, you accept and agree to the following terms and conditions for your present and future contributions submitted to Spectrumkit. Except for @@ -94,7 +94,7 @@ To run the tests, the linters, or build the documentation use tox -e docs .. _Tox: https://tox.readthedocs.io/en/latest/ -.. _`Spectrumkit develop project` : https://github.com/maicos-devel/spectrumkit +.. _`Spectrumkit develop project` : https://github.com/atomistic-lab/spectrumkit Useful developer scripts ------------------------ diff --git a/README.rst b/README.rst index 00d0e8b..b3a878c 100644 --- a/README.rst +++ b/README.rst @@ -22,7 +22,7 @@ possible improvements and usages of Spectrumkit. .. _`MDAnalysis`: https://www.mdanalysis.org .. _`Twitter`: https://twitter.com/maicos_analysis -.. _`GitHub`: https://github.com/maicos-devel/spectrumkit +.. _`GitHub`: https://github.com/atomistic-lab/spectrumkit .. _`Discord`: https://discord.gg/mnrEQWVAed .. inclusion-readme-intro-end @@ -33,8 +33,8 @@ Documentation For details, tutorials, and examples, visit our official `documentation`_. We also provide the `latest documentation`_ for the current development version of Spectrumkit. -.. _`documentation`: https://maicos-devel.github.io/spectrumkit -.. _`latest documentation`: https://maicos-devel.github.io/spectrumkit/latest +.. _`documentation`: https://atomistic-lab.github.io/spectrumkit +.. _`latest documentation`: https://atomistic-lab.github.io/spectrumkit/latest .. inclusion-readme-installation-start @@ -72,16 +72,16 @@ Contributors Thanks to all contributors who make **Spectrumkit** possible: -.. image:: https://contrib.rocks/image?repo=maicos-devel/spectrumkit - :target: https://github.com/maicos-devel/spectrumkit/graphs/contributors +.. image:: https://contrib.rocks/image?repo=atomistic-lab/spectrumkit + :target: https://github.com/atomistic-lab/spectrumkit/graphs/contributors -.. |tests| image:: https://github.com/maicos-devel/spectrumkit/workflows/Tests/badge.svg +.. |tests| image:: https://github.com/atomistic-lab/spectrumkit/workflows/Tests/badge.svg :alt: GitHub Actions Tests Job Status - :target: https://github.com/maicos-devel/spectrumkit/actions?query=branch%3Amain + :target: https://github.com/atomistic-lab/spectrumkit/actions?query=branch%3Amain -.. |codecov| image:: https://codecov.io/gh/maicos-devel/spectrumkit/graph/badge.svg?token=9AXPLF6CR3 +.. |codecov| image:: https://codecov.io/gh/atomistic-lab/spectrumkit/graph/badge.svg?token=9AXPLF6CR3 :alt: Code coverage - :target: https://codecov.io/gh/maicos-devel/spectrumkit + :target: https://codecov.io/gh/atomistic-lab/spectrumkit .. |docs-stable| image:: https://img.shields.io/badge/📚_Documentation-stable-success :alt: Documentation of stable released version diff --git a/docs/src/analysis-modules/index.rst b/docs/src/analysis-modules/index.rst index a33248e..29569ef 100644 --- a/docs/src/analysis-modules/index.rst +++ b/docs/src/analysis-modules/index.rst @@ -9,7 +9,7 @@ Once you understand the basic structure taught there, you can work with all modules. If not, feel free to raise an issue in GitHub_ or ask us on Discord_. -.. _`GitHub`: https://github.com/maicos-devel/spectrumkit/issues +.. _`GitHub`: https://github.com/atomistic-lab/spectrumkit/issues .. _`Discord`: https://discord.gg/mnrEQWVAed .. toctree:: diff --git a/pyproject.toml b/pyproject.toml index fcc05da..14d6750 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -45,9 +45,9 @@ dynamic = ["version"] examples = ["matplotlib"] [project.urls] -homepage = "https://github.com/maicos-devel/spectrumkit" -repository = "https://github.com/maicos-devel/spectrumkit" -issues = "https://github.com/maicos-devel/spectrumkit/issues" +homepage = "https://github.com/atomistic-lab/spectrumkit" +repository = "https://github.com/atomistic-lab/spectrumkit" +issues = "https://github.com/atomistic-lab/spectrumkit/issues" [tool.check-manifest] # ignore files missing in VCS diff --git a/tox.ini b/tox.ini index 262409e..05404f8 100644 --- a/tox.ini +++ b/tox.ini @@ -39,7 +39,7 @@ commands = description = Run test suite against MAICoS dev version deps = -r tests/requirements.txt - maicos @ git+https://github.com/maicos-devel/maicos.git + maicos @ git+https://github.com/atomistic-lab/maicos.git commands = pytest {posargs}