From 123456876ae4e1150dbdb9638bc943fcce5bc858 Mon Sep 17 00:00:00 2001 From: Leonardo Schwarz Date: Fri, 7 Aug 2026 13:31:14 +0200 Subject: [PATCH 1/2] feat: consolidate check-tests-structure hook into this repository Vendors the check-tests-structure tool from leoschwarz/check-tests-structure into .ci/check-tests-structure/ as a self-contained MIT-licensed subproject and publishes it through a root .pre-commit-hooks.yaml, so FGCZ projects can consume the hook without depending on a personal account. The subproject keeps its own pyproject.toml and uv.lock, and is excluded from the strict Pyright, coverage, and deptry gates that apply to the reference package. The hook runs on this repository in the pre-commit stage and the subproject's tests run in the pre-push stage. --- .ci/check-tests-structure/LICENSE | 21 + .ci/check-tests-structure/README.md | 50 +++ .ci/check-tests-structure/pyproject.toml | 38 ++ .../src/check_tests_structure/__init__.py | 0 .../src/check_tests_structure/__main__.py | 42 ++ .../src/check_tests_structure/compare.py | 85 ++++ .../src/check_tests_structure/config.py | 39 ++ .../src/check_tests_structure/lookup.py | 50 +++ .../tests/test_compare.py | 22 + .../tests/test_config.py | 43 ++ .../tests/test_lookup.py | 48 ++ .ci/check-tests-structure/uv.lock | 422 ++++++++++++++++++ .github/dependabot.yml | 8 + .pre-commit-config.yaml | 20 + .pre-commit-hooks.yaml | 12 + AGENTS.md | 10 + CHANGELOG.md | 6 + README.md | 9 +- docs/AGENTS.md | 1 + docs/check-tests-structure.md | 87 ++++ docs/development.md | 5 +- mkdocs.yml | 1 + pyproject.toml | 10 + 23 files changed, 1025 insertions(+), 4 deletions(-) create mode 100644 .ci/check-tests-structure/LICENSE create mode 100644 .ci/check-tests-structure/README.md create mode 100644 .ci/check-tests-structure/pyproject.toml create mode 100644 .ci/check-tests-structure/src/check_tests_structure/__init__.py create mode 100644 .ci/check-tests-structure/src/check_tests_structure/__main__.py create mode 100644 .ci/check-tests-structure/src/check_tests_structure/compare.py create mode 100644 .ci/check-tests-structure/src/check_tests_structure/config.py create mode 100644 .ci/check-tests-structure/src/check_tests_structure/lookup.py create mode 100644 .ci/check-tests-structure/tests/test_compare.py create mode 100644 .ci/check-tests-structure/tests/test_config.py create mode 100644 .ci/check-tests-structure/tests/test_lookup.py create mode 100644 .ci/check-tests-structure/uv.lock create mode 100644 .pre-commit-hooks.yaml create mode 100644 docs/check-tests-structure.md diff --git a/.ci/check-tests-structure/LICENSE b/.ci/check-tests-structure/LICENSE new file mode 100644 index 0000000..c439127 --- /dev/null +++ b/.ci/check-tests-structure/LICENSE @@ -0,0 +1,21 @@ +MIT License + +Copyright (c) 2024 ETH Zurich, Leonardo Schwarz + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the "Software"), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in all +copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE +SOFTWARE. diff --git a/.ci/check-tests-structure/README.md b/.ci/check-tests-structure/README.md new file mode 100644 index 0000000..1b78206 --- /dev/null +++ b/.ci/check-tests-structure/README.md @@ -0,0 +1,50 @@ +# check-tests-structure + +Validates that a project's tests folder structure mirrors its sources folder +structure, so that every module has a test module next to the same relative +path. Configured entirely from the checked project's `pyproject.toml`. + +```toml +[tool.check-tests-structure] +sources_path = "src/my_package" # required +tests_path = "tests/unit" # required +allow_missing_tests = true # do not fail on sources without a test +``` + +| Key | Default | Purpose | +|---|---|---| +| `sources_path` | required | Root of the sources tree, relative to the working directory | +| `tests_path` | required | Root of the tests tree, relative to the working directory | +| `inputs_glob` | `["*.py"]` | Source files to consider | +| `tests_glob` | `["test_*.py"]` | Test files to consider | +| `tests_pattern` | `test_(.*).py` | Maps a test filename back to its source name | +| `allow_missing_sources` | `false` | Tolerate tests without a matching source | +| `allow_missing_tests` | `false` | Tolerate sources without a matching test | +| `excluded_files` | `["__init__.py", "__main__.py"]` | Never reported | + +Unmatched files are printed with fuzzy-matched suggestions, and the command +exits non-zero unless the corresponding `allow_missing_*` option is set. + +Both paths are resolved against the **working directory**, not against the +directory holding the `pyproject.toml`. In a workspace, run the check from the +member's own directory. + +See [the project documentation](../../docs/check-tests-structure.md) for how +other repositories consume this as a pre-commit hook. + +## Development + +This is a self-contained subproject: it is not part of the reference package, +not a uv workspace member, and it keeps its own `uv.lock`. + +```bash +uv run --directory .ci/check-tests-structure --frozen pytest +``` + +## Provenance + +Imported from at commit +`1228f93`, including the then-unreleased fixes to the `allow_missing_*` options +and the simplified entry point. Consolidated here so that FGCZ projects do not +depend on a personal account. Distributed under the MIT license (see `LICENSE`), +unlike the Apache-2.0 licensed reference project around it. diff --git a/.ci/check-tests-structure/pyproject.toml b/.ci/check-tests-structure/pyproject.toml new file mode 100644 index 0000000..1e6494a --- /dev/null +++ b/.ci/check-tests-structure/pyproject.toml @@ -0,0 +1,38 @@ +[project] +name = "fgcz-check-tests-structure" +version = "0.1.0" +description = "Checks if your test folder structure corresponds to the source folder structure" +authors = [{ name = "Leonardo Schwarz", email = "leonardo.schwarz@fgcz.ethz.ch" }] +readme = "README.md" +license = { text = "MIT" } +requires-python = ">=3.11" + +dependencies = [ + "cyclopts>=2.9", + "pydantic>=2.9", + "rapidfuzz>=3.10", +] + +[project.scripts] +check-tests-structure = "check_tests_structure.__main__:app" + +[dependency-groups] +dev = [ + "pyfakefs>=5.7", + "pytest>=8", + "pytest-mock>=3.14", +] + +[build-system] +requires = ["setuptools >= 61.0"] +build-backend = "setuptools.build_meta" + +[tool.setuptools.packages.find] +where = ["src"] + +[tool.pytest.ini_options] +testpaths = ["tests"] + +[tool.check-tests-structure] +sources_path = "src/check_tests_structure" +tests_path = "tests" diff --git a/.ci/check-tests-structure/src/check_tests_structure/__init__.py b/.ci/check-tests-structure/src/check_tests_structure/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/.ci/check-tests-structure/src/check_tests_structure/__main__.py b/.ci/check-tests-structure/src/check_tests_structure/__main__.py new file mode 100644 index 0000000..cfd0611 --- /dev/null +++ b/.ci/check-tests-structure/src/check_tests_structure/__main__.py @@ -0,0 +1,42 @@ +import sys +from pathlib import Path + +import cyclopts + +from check_tests_structure.compare import Compare +from check_tests_structure.config import ( + Config, + find_pyproject_toml, + parse_pyproject_toml, +) + +app = cyclopts.App() + + +def run_check(config: Config) -> None: + compare = Compare(config=config) + differences = compare.get_differences() + compare.print_differences(differences) + if (differences["source"] and not config.allow_missing_tests) or ( + differences["test"] and not config.allow_missing_sources + ): + sys.exit(1) + + +@app.default +def run(path: Path | None = None) -> None: + # find the pyproject.toml + pyproject_toml = find_pyproject_toml(path or Path.cwd()) + if not pyproject_toml: + print("No pyproject.toml found.") + sys.exit(1) + + # parse the pyproject.toml + config = parse_pyproject_toml(pyproject_toml) + + # run the check + run_check(config) + + +if __name__ == "__main__": + app() diff --git a/.ci/check-tests-structure/src/check_tests_structure/compare.py b/.ci/check-tests-structure/src/check_tests_structure/compare.py new file mode 100644 index 0000000..0d4f7c5 --- /dev/null +++ b/.ci/check-tests-structure/src/check_tests_structure/compare.py @@ -0,0 +1,85 @@ +from __future__ import annotations + +from functools import cached_property + +from check_tests_structure.config import Config +from check_tests_structure.lookup import Lookup + + +class Compare: + def __init__(self, config: Config): + self._config = config + + def get_differences(self) -> dict[str, list[dict[str, str]]]: + """Returns the differences between the source and test files. + This will be a dictionary with two keys: 'source' and 'test', each containing a + list of entries of the files that are only present in that particular folder. + """ + differences = {"source": [], "test": []} + for source_file in self.source_files: + if not self.test_files.exists(source_file): + differences["source"].append(source_file) + for test_file in self.test_files: + if not self.source_files.exists(test_file): + differences["test"].append(test_file) + return differences + + def print_differences(self, differences: dict[str, list[dict[str, str]]]) -> None: + """Prints the differences between the source and test files.""" + if not differences["source"] and not differences["test"]: + print("No differences found.") + return + if differences["source"]: + print("Source files not in test folder:") + for source in differences["source"]: + print(f" {source['dir']}/{source['original_name']}") + self.test_files.print_fuzzy_matches( + source, " - {dir}/{original_name} ({score:.1f}% match)" + ) + if differences["test"]: + print("Test files not in source folder:") + for test in differences["test"]: + print(f" {test['dir']}/{test['original_name']}") + self.source_files.print_fuzzy_matches( + test, " - {dir}/{original_name} ({score:.1f}% match)" + ) + + @cached_property + def source_files(self) -> Lookup: + """Lists all source files in the sources folder, relative to the sources folder.""" + paths = { + path.relative_to(self._config.sources_path) + for glob_pattern in self._config.inputs_glob + for path in self._config.sources_path.rglob(glob_pattern) + if path.name not in self._config.excluded_files + } + return Lookup( + [ + {"dir": str(path.parent), "original_name": path.name, "name": path.stem} + for path in sorted(paths) + ] + ) + + @cached_property + def test_files(self) -> Lookup: + """Lists all test files in the tests folder, relative to the tests folder.""" + paths = { + path.relative_to(self._config.tests_path) + for glob_pattern in self._config.tests_glob + for path in self._config.tests_path.rglob(glob_pattern) + if path.name not in self._config.excluded_files + } + entries = [ + { + "dir": str(path.parent), + "original_name": path.name, + "name": self._get_test_name(path.name), + } + for path in sorted(paths) + ] + return Lookup([entry for entry in entries if entry["name"] is not None]) + + def _get_test_name(self, filename: str) -> str | None: + """Extracts the test name from the test filename.""" + matching = self._config.tests_pattern.match(filename) + return matching.group(1) if matching else None diff --git a/.ci/check-tests-structure/src/check_tests_structure/config.py b/.ci/check-tests-structure/src/check_tests_structure/config.py new file mode 100644 index 0000000..b9e62ee --- /dev/null +++ b/.ci/check-tests-structure/src/check_tests_structure/config.py @@ -0,0 +1,39 @@ +from __future__ import annotations + +import re +import tomllib +from pathlib import Path + +from pydantic import BaseModel, ConfigDict + + +class Config(BaseModel): + model_config = ConfigDict(validate_default=True) + + sources_path: Path + tests_path: Path + + inputs_glob: list[str] = ["*.py"] + tests_glob: list[str] = ["test_*.py"] + tests_pattern: re.Pattern[str] = re.compile(r"test_(.*).py") + + allow_missing_sources: bool = False + allow_missing_tests: bool = False + + excluded_files: list[str] = ["__init__.py", "__main__.py"] + + +def find_pyproject_toml(path: Path) -> Path | None: + """Searches for the pyproject.toml file in the given path or any of its parent directories.""" + while not (path / "pyproject.toml").exists(): + if path == path.parent: + break + path = path.parent + if (path / "pyproject.toml").exists(): + return path / "pyproject.toml" + return None + + +def parse_pyproject_toml(path: Path) -> Config: + metadata = tomllib.loads(path.read_text()) + return Config.model_validate(metadata.get("tool", {}).get("check-tests-structure", {})) diff --git a/.ci/check-tests-structure/src/check_tests_structure/lookup.py b/.ci/check-tests-structure/src/check_tests_structure/lookup.py new file mode 100644 index 0000000..84edfdc --- /dev/null +++ b/.ci/check-tests-structure/src/check_tests_structure/lookup.py @@ -0,0 +1,50 @@ +from pathlib import Path + +import rapidfuzz + + +class Lookup: + # TODO this is the naive implementation, as a proof of concept, of course we can + # make it faster later + + def __init__(self, entries_list: list[dict[str, str]]): + self._entries_list = entries_list + + @property + def entries_list(self) -> list[dict[str, str]]: + return self._entries_list + + def exists(self, entry: dict[str, str]) -> bool: + for entry_ in self._entries_list: + if entry["dir"] == entry_["dir"] and entry["name"] == entry_["name"]: + return True + return False + + def fuzzy_match(self, entry: dict[str, str], n_max: int) -> list[tuple[str, float, int]]: + # prepare the inputs + entry_path = str(Path(entry["dir"]) / entry["name"]) + entries_list_paths = [ + str(Path(entry_["dir"]) / entry_["name"]) for entry_ in self._entries_list + ] + # find the best matches + return rapidfuzz.process.extract( + entry_path, entries_list_paths, scorer=rapidfuzz.fuzz.WRatio, limit=n_max + ) + + def print_fuzzy_matches( + self, + entry: dict[str, str], + template: str, + threshold: float = 90, + n_max: int = 5, + ): + for _file, score, index in self.fuzzy_match(entry=entry, n_max=n_max): + if score >= threshold: + entry = self._entries_list[index] + print(template.format(**entry, score=score)) + + def __iter__(self): + return iter(self._entries_list) + + def __len__(self): + return len(self._entries_list) diff --git a/.ci/check-tests-structure/tests/test_compare.py b/.ci/check-tests-structure/tests/test_compare.py new file mode 100644 index 0000000..c37e855 --- /dev/null +++ b/.ci/check-tests-structure/tests/test_compare.py @@ -0,0 +1,22 @@ +from pathlib import Path + +import pytest +from check_tests_structure.compare import Compare +from check_tests_structure.config import Config + + +@pytest.fixture +def mock_config(): + return Config( + sources_path=Path("/dev/null/sources"), + tests_path=Path("/dev/null/tests"), + ) + + +@pytest.fixture +def mock_compare(mock_config): + return Compare(mock_config) + + +def test_get_name(mock_compare): + assert mock_compare._get_test_name("test_my_test.py") == "my_test" diff --git a/.ci/check-tests-structure/tests/test_config.py b/.ci/check-tests-structure/tests/test_config.py new file mode 100644 index 0000000..f6950f5 --- /dev/null +++ b/.ci/check-tests-structure/tests/test_config.py @@ -0,0 +1,43 @@ +from pathlib import Path + +from check_tests_structure.config import find_pyproject_toml, parse_pyproject_toml + + +def test_find_pyproject_toml_initial_when_project_root(fs): + fs.create_file("/my_project/pyproject.toml") + assert find_pyproject_toml(Path("/my_project")) == Path("/my_project/pyproject.toml") + + +def test_find_pyproject_toml_initial_when_passed_already(fs): + fs.create_file("/my_project/pyproject.toml") + assert find_pyproject_toml(Path("/my_project/pyproject.toml")) == Path( + "/my_project/pyproject.toml" + ) + + +def test_find_pyproject_toml_when_sub_directory(fs): + fs.create_file("/my_project/pyproject.toml") + assert find_pyproject_toml(Path("/my_project/subdir")) == Path("/my_project/pyproject.toml") + + +def test_find_pyproject_toml_when_sub_sub_directory(fs): + fs.create_file("/my_project/pyproject.toml") + assert find_pyproject_toml(Path("/my_project/subdir/subsubdir")) == Path( + "/my_project/pyproject.toml" + ) + + +def test_find_pyproject_toml_when_not_found(fs): + assert find_pyproject_toml(Path("/my_project")) is None + + +def test_parse_pyproject_toml_when_minimal(mocker): + mock_path = mocker.Mock() + mock_path.read_text.return_value = """ + [tool.check-tests-structure] + sources_path = "src" + tests_path = "tests" + """ + config = parse_pyproject_toml(path=mock_path) + assert config.sources_path == Path("src") + assert config.tests_path == Path("tests") diff --git a/.ci/check-tests-structure/tests/test_lookup.py b/.ci/check-tests-structure/tests/test_lookup.py new file mode 100644 index 0000000..a038f0a --- /dev/null +++ b/.ci/check-tests-structure/tests/test_lookup.py @@ -0,0 +1,48 @@ +import pytest +from check_tests_structure.lookup import Lookup + + +@pytest.fixture +def mock_entries_list(): + return [ + {"dir": "/test_proj/dir1", "name": "file1", "original_name": "file1.py"}, + {"dir": "/test_proj/dir2", "name": "file2", "original_name": "file2.py"}, + {"dir": "/test_proj/dir3", "name": "file3", "original_name": "file3.py"}, + ] + + +@pytest.fixture +def mock_lookup(mock_entries_list): + return Lookup(entries_list=mock_entries_list) + + +def test_exists(mock_lookup): + assert mock_lookup.exists({"dir": "/test_proj/dir1", "name": "file1"}) + assert not mock_lookup.exists({"dir": "/test_proj/dir1", "name": "file2"}) + assert mock_lookup.exists({"dir": "/test_proj/dir2", "name": "file2"}) + assert not mock_lookup.exists({"dir": "/test_proj/dir2", "name": "file1"}) + + +def test_fuzz_match(mock_lookup): + matches = mock_lookup.fuzzy_match({"dir": "/test_proj/dir2", "name": "filee2"}, n_max=1) + assert len(matches) == 1 + assert matches[0][0] == "/test_proj/dir2/file2" + assert matches[0][1] > 97 + assert matches[0][2] == 1 + + +def test_print_fuzzy_matches(mocker, mock_lookup, capsys): + mocker.patch.object(Lookup, "fuzzy_match", return_value=[("/test_proj/dir2/file2", 97.7, 1)]) + mock_lookup.print_fuzzy_matches( + {"dir": "/test_proj/dir2", "name": "filee2"}, "{dir}/{name} ({score:.1f}%)" + ) + captured = 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run --project .ci/check-tests-structure --frozen check-tests-structure + language: system + always_run: true + pass_filenames: false + stages: [pre-commit] + + - id: check-tests-structure-tests + name: vendored hook tests + # --directory does change the working directory, keeping this suite separate + # from the reference project's own tests. + entry: uv run --directory .ci/check-tests-structure --frozen pytest + language: system + always_run: true + pass_filenames: false + stages: [pre-push] + - id: pytest-coverage name: tests and branch coverage entry: >- diff --git a/.pre-commit-hooks.yaml b/.pre-commit-hooks.yaml new file mode 100644 index 0000000..912c236 --- /dev/null +++ b/.pre-commit-hooks.yaml @@ -0,0 +1,12 @@ +# Hook manifest consumed by other repositories. The tool itself lives in +# .ci/check-tests-structure/; pre-commit installs `additional_dependencies` +# with the cloned hook repository as the working directory, which is what makes +# the relative path below resolve to that subproject. +- id: check-tests-structure + name: check tests structure + description: Verify that the tests tree mirrors the sources tree. + language: python + entry: check-tests-structure + additional_dependencies: ["./.ci/check-tests-structure"] + pass_filenames: false + types: [python] diff --git a/AGENTS.md b/AGENTS.md index 31d1df1..20d30f6 100644 --- a/AGENTS.md +++ b/AGENTS.md @@ -26,6 +26,8 @@ instructions override repository files. | `scripts/` | Changed-line coverage and wheel inspection | | `docs/` | MkDocs source; see `docs/AGENTS.md` | | `.github/workflows/` | CI, Pages, and scheduled audit; see its `AGENTS.md` | +| `.ci/check-tests-structure/` | Vendored `check-tests-structure` hook; self-contained subproject | +| `.pre-commit-hooks.yaml` | Hook manifest other repositories consume | ## Golden samples @@ -44,6 +46,14 @@ instructions override repository files. - Pyright strict mode and 100% line/branch coverage are blocking. - Add domain-specific checks as hooks, then invoke the same hooks from CI. - Record user-visible changes under `Unreleased` in `CHANGELOG.md`. +- `.ci/check-tests-structure/` is vendored, MIT-licensed, and keeps its own + `pyproject.toml` and `uv.lock`; it is not a uv workspace member and not part of + the reference distribution. Root Ruff lints it, but Pyright, coverage, and + deptry deliberately exclude it. Run its suite with + `uv run --directory .ci/check-tests-structure --frozen pytest`. +- Changing `.pre-commit-hooks.yaml` changes a public interface for other + repositories; the `additional_dependencies` relative path there is what makes + the subdirectory installable through pre-commit. ## Boundaries diff --git a/CHANGELOG.md b/CHANGELOG.md index 0b5add9..d0bbe6c 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -6,6 +6,12 @@ The format follows [Keep a Changelog](https://keepachangelog.com/en/1.1.0/). ### Added +- The `check-tests-structure` hook, consolidated from + `leoschwarz/check-tests-structure` into `.ci/check-tests-structure/` and + published from this repository through `.pre-commit-hooks.yaml`, so that FGCZ + projects no longer depend on a personal account. It runs on this repository in + the `pre-commit` stage, and its own test suite runs in the `pre-push` stage. + - CI matrix that runs the tests across the supported Python range and dependency-resolution bounds (`lowest-direct` on the minimum interpreter, `highest` on the maximum). diff --git a/README.md b/README.md index 258ae22..bdc82ff 100644 --- a/README.md +++ b/README.md @@ -5,6 +5,10 @@ the Functional Genomics Center Zurich. Its purpose is to demonstrate a complete package layout and an aligned local/remote quality workflow, not to provide domain functionality that other projects should depend on. +It additionally hosts one shared quality hook that other FGCZ repositories do +consume: [`check-tests-structure`](docs/check-tests-structure.md). The hook lives +in `.ci/check-tests-structure/`, separate from the reference package. + The example slug library and CLI are intentionally minimal. They make the package build, public interface, success path, error path, tests, coverage, documentation, and console entry point concrete enough to validate. When @@ -21,6 +25,7 @@ structure and quality gates. | Documentation | MkDocs Material site built with `--strict` and deployable to GitHub Pages | | Agent guidance | Verified root and scoped `AGENTS.md` files with Claude/Gemini symlinks | | Automation | Pre-commit, pre-push, pull-request CI, Pages deployment, and a weekly security audit | +| Shared tooling | The `check-tests-structure` pre-commit hook, vendored in `.ci/` and offered to other repositories | ## Quality gates @@ -29,8 +34,8 @@ a local hook does not bypass the merge gate. | Stage | Checks | |---|---| -| `pre-commit` | Ruff lint and format, including complexity/design rules; strict Pyright; deptry | -| `pre-push` | pytest with 100% branch coverage; 100% changed-line coverage; sdist/wheel inspection; strict MkDocs | +| `pre-commit` | Ruff lint and format, including complexity/design rules; strict Pyright; deptry; the tests-mirror-sources hook | +| `pre-push` | pytest with 100% branch coverage; 100% changed-line coverage; sdist/wheel inspection; strict MkDocs; the vendored hook's own tests | | Manual and weekly CI | pip-audit against the frozen installed environment | The hook definitions live in `.pre-commit-config.yaml`; CI calls the complete diff --git a/docs/AGENTS.md b/docs/AGENTS.md index b898c1d..c6ce1a5 100644 --- a/docs/AGENTS.md +++ b/docs/AGENTS.md @@ -23,6 +23,7 @@ Install the locked documentation group from the repository root: | File | Purpose | |---|---| | `index.md` | Project overview and library example | +| `check-tests-structure.md` | Shared hook: configuration and consumer snippets | | `getting-started.md` | Installation and first command | | `development.md` | Local and CI quality workflow | diff --git a/docs/check-tests-structure.md b/docs/check-tests-structure.md new file mode 100644 index 0000000..e3a9679 --- /dev/null +++ b/docs/check-tests-structure.md @@ -0,0 +1,87 @@ +# check-tests-structure hook + +Besides the reference package, this repository hosts one shared quality hook: +`check-tests-structure` verifies that a project's tests tree mirrors its sources +tree, so that every module has a test module at the same relative path. It lives +in `.ci/check-tests-structure/` as a self-contained subproject and is published +only as a pre-commit hook — there is no package on PyPI to install. + +## Configuration + +Add the tool's section to the `pyproject.toml` of the project being checked: + +```toml +[tool.check-tests-structure] +sources_path = "src/my_package" +tests_path = "tests/unit" +allow_missing_tests = true +``` + +`sources_path` and `tests_path` are required; the remaining keys are documented +in `.ci/check-tests-structure/README.md`. Unmatched files are printed with +fuzzy-matched suggestions, and the hook fails unless the matching +`allow_missing_sources` / `allow_missing_tests` option is set. + +Both paths are resolved against the working directory rather than the directory +containing the `pyproject.toml`, so in a multi-package workspace the check has +to run from the member's own directory. + +## Using it from another repository + +```yaml +repos: + - repo: https://github.com/fgcz/fgcz_python_project_templete + rev: v0.2.0 + hooks: + - id: check-tests-structure +``` + +Pin `rev` to a released tag of this repository; `pre-commit autoupdate` moves it +to the latest one. The examples below use the same tag. + +The hook environment installs this repository's root package, which requires +Python 3.12 or newer. If the hook environment runs an older interpreter, depend +on the subproject directly instead: + +```yaml +repos: + - repo: local + hooks: + - id: check-tests-structure + name: check tests structure + language: python + entry: check-tests-structure + pass_filenames: false + always_run: true + additional_dependencies: + - "fgcz-check-tests-structure @ git+https://github.com/fgcz/fgcz_python_project_templete@v0.2.0#subdirectory=.ci/check-tests-structure" +``` + +The same requirement specifier works outside pre-commit, for example in a nox +session: + +```python +@nox.session(default=False) +def tests_structure(session) -> None: + """Performs a check on the test structure.""" + session.install( + "git+https://github.com/fgcz/fgcz_python_project_templete" + "@v0.2.0#subdirectory=.ci/check-tests-structure" + ) + session.run("check-tests-structure") +``` + +## How it is gated here + +This repository runs the hook on itself in the `pre-commit` stage and runs the +subproject's own test suite in the `pre-push` stage: + +```bash +uv run --project .ci/check-tests-structure --frozen check-tests-structure +uv run --directory .ci/check-tests-structure --frozen pytest +``` + +The vendored code keeps its own `pyproject.toml`, `uv.lock`, and MIT license. It +is linted and formatted by the repository-wide Ruff configuration, but excluded +from the strict Pyright, 100% coverage, and deptry gates that apply to the +reference package. diff --git a/docs/development.md b/docs/development.md index fefd45f..c994138 100644 --- a/docs/development.md +++ b/docs/development.md @@ -8,7 +8,8 @@ The local hooks are the source for the GitHub Actions quality commands. uv run pre-commit run --hook-stage pre-commit --all-files ``` -This runs Ruff, strict Pyright, and deptry. +This runs Ruff, strict Pyright, deptry, and the +[tests-mirror-sources hook](check-tests-structure.md). ## Every push @@ -17,7 +18,7 @@ uv run pre-commit run --hook-stage pre-push --all-files ``` This runs tests with branch coverage, changed-line coverage, package inspection, -and a strict documentation build. +a strict documentation build, and the vendored hook's own test suite. ## Dependency audit diff --git a/mkdocs.yml b/mkdocs.yml index 122a09b..bab394a 100644 --- a/mkdocs.yml +++ b/mkdocs.yml @@ -14,6 +14,7 @@ nav: - Home: index.md - Getting started: getting-started.md - Development: development.md + - check-tests-structure hook: check-tests-structure.md markdown_extensions: - admonition diff --git a/pyproject.toml b/pyproject.toml index 298f1d6..dc5c7b2 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -83,6 +83,9 @@ convention = "google" [tool.ruff.lint.per-file-ignores] "tests/**" = ["S101", "D", "ANN", "PLR2004", "ARG"] "scripts/**" = ["S603", "S607", "D", "PLR2004", "EM"] +# Vendored third-party hook: linted and formatted, but not held to this project's +# docstring, annotation, and typing rules. See .ci/check-tests-structure/README.md. +".ci/**" = ["S101", "D", "ANN", "EM", "PLR2004", "ARG", "TC"] [tool.ruff.format] quote-style = "double" @@ -103,3 +106,10 @@ show_missing = true [tool.deptry] known_first_party = ["fgcz_reference_project"] +# The vendored hook in .ci/ is a separate distribution with its own dependencies; +# deptry would otherwise report them against this zero-dependency project. +extend_exclude = ["\\.ci"] + +[tool.check-tests-structure] +sources_path = "src/fgcz_reference_project" +tests_path = "tests" From cce91a579d5471b81c6887899235ba1579e46b1f Mon Sep 17 00:00:00 2001 From: Leonardo Schwarz Date: Fri, 7 Aug 2026 14:46:48 +0200 Subject: [PATCH 2/2] docs: use the canonical repository URL in consumer snippets --- docs/check-tests-structure.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/docs/check-tests-structure.md b/docs/check-tests-structure.md index e3a9679..0bb6bc4 100644 --- a/docs/check-tests-structure.md +++ b/docs/check-tests-structure.md @@ -30,7 +30,7 @@ to run from the member's own directory. ```yaml repos: - - repo: https://github.com/fgcz/fgcz_python_project_templete + - repo: https://github.com/fgcz/fgcz_python_project_template rev: v0.2.0 hooks: - id: check-tests-structure @@ -54,7 +54,7 @@ repos: pass_filenames: false always_run: true additional_dependencies: - - "fgcz-check-tests-structure @ git+https://github.com/fgcz/fgcz_python_project_templete@v0.2.0#subdirectory=.ci/check-tests-structure" + - "fgcz-check-tests-structure @ git+https://github.com/fgcz/fgcz_python_project_template@v0.2.0#subdirectory=.ci/check-tests-structure" ``` The same requirement specifier works outside pre-commit, for example in a nox @@ -65,7 +65,7 @@ session: def tests_structure(session) -> None: """Performs a check on the test structure.""" session.install( - "git+https://github.com/fgcz/fgcz_python_project_templete" + "git+https://github.com/fgcz/fgcz_python_project_template" "@v0.2.0#subdirectory=.ci/check-tests-structure" ) session.run("check-tests-structure")