Andersen Lab

Scripts, data, figures, and tables for the C. elegans pangenome manuscript

Data, scripts, and figures for the C. briggsae anthelmintic dose response (DRC) paper

A reproducible nextflow to call HDRs in selfing nematodes.

Nextflow pipeline for calling NILs and RILs

This is a repository for storing all scripts related to genome assembly, gene annotation, SV calling, GFF/FA file manipulation, functional enrichment analysis, gene set visualization, and syntelog decompression.

The new GATK-based pipeline for wild isolate C. elegans strains

Andersen Lab Website

scripts, figures, and tables for C. briggsae PopGen and HDR manuscript