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Update and Major fixes to the Model and Pathway Loss - #5

Merged

BenjaminIsaac0111 merged 10 commits into

mainfrom

feature/prototype-results

Mar 4, 2026

Commits on Feb 27, 2026
- feat: add prototype visualization and organ filtering
  BenjaminIsaac0111
  committed
  c24d59b
- fix: correct spatial-pe argument handling
  BenjaminIsaac0111
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  cd0f00c
- fix: sync num_genes with global_genes.json
  BenjaminIsaac0111
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  3db1987
- fix: global sync of num_genes across model and data
  BenjaminIsaac0111
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  dd03c61
Commits on Mar 2, 2026
- - Updated the monitoring dashboard with a more modern look and refactored for better maintainbility.
  BenjaminIsaac0111
  committed
  63d0912
- refactor: modularize training pipeline and stabilize model initialization
  BenjaminIsaac0111
  committed
  c032d76
Commits on Mar 3, 2026
- test: updated unit tests with architectural and API changes
  BenjaminIsaac0111
  committed
  842d2b2
Commits on Mar 4, 2026