Call the shared CTTIR workflows - #3
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August 22, 2026 10:34
Replaces copied R-CMD-check and test-coverage YAML with caller stubs and adds the house lint workflow. Behaviour that comes with the shared versions: an oldrel-3 job so the R version DESCRIPTION claims is actually built, --as-cran, a coverage gate computed with covr and an explicit exit rather than delegated to Codecov, and fail_ci_if_error on upload. Coverage floor is 0 for now - this fixes the measurement, not the gate. Lint is report-only.
CTTIR/.github now gives lint the CTTIR r-universe (several packages Suggest sibling CTTIR packages, and pak could not solve them) and marks oldrel-3 informational (it was failing on a 404 Bioconductor mirror for old R, not on package code).
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Converts this package to the shared CTTIR workflows (CTTIR/.github#2), validated by the hexmakR pilot (CTTIR/hexmakR#3).
What changes
R-CMD-checkgains anoldrel-3job, so the R versionDESCRIPTIONactually claims to support is built, and passes--as-cran.test-coveragecomputes its gate in the workflow with covr and an explicit exit instead of delegating to Codecov, and uploads withfail_ci_if_error: true. Nine of 22 repos currently reportactive: false, totals: nullto Codecov behind a green build, because a deactivated Codecov fails nothing.lintis new, running the CTTIR house naming linters. Report-only — turning it on as a gate would red five repositories on day one.Deliberately conservative
floor: 0on coverage, so this changes the measurement without adding a gate. Set a real floor once each package is re-baselined — the old configs usedtarget: auto, threshold: 1%, which compares only against the base commit and so permits unlimited decay in 1% steps.pkgdown,api-lockand any repo-specific workflows are untouched.