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Palette: fold the two rarest interaction types, and hold the UMAP palette to the same floor (#532, #601, #602) #600

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Merged
realmarcin merged 3 commits into from
Aug 15, 2026
Merged

Palette: fold the two rarest interaction types, and hold the UMAP palette to the same floor (#532, #601, #602) #600

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df4ced0
Fold the two rarest interaction types so the palette clears tritanopi…
realmarcin Aug 15, 2026
b47d3ea
Hold the UMAP palette to the same floor as the network one (#601, #602)
realmarcin Aug 15, 2026
70647f4
Gate the published UMAP page by comparison, not regeneration (#602)
realmarcin Aug 15, 2026
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12 changes: 4 additions & 8 deletions docs/communities/AMD_Acidophile_Heterotroph_Network.html
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Expand Up @@ -787,7 +787,7 @@ <h2>Ecological Interactions</h2>
<div class="legend-item">
<svg class="legend-symbol" width="14" height="14" viewBox="-9 -9 18 18"
aria-hidden="true" data-symbol="symbolSquare"
data-color="#56bbe6"></svg> Mutualism
data-color="#9f2ebb"></svg> Mutualism
</div>
</div>
</div>
Expand Down Expand Up @@ -1526,14 +1526,12 @@ <h2>Environmental Factors</h2>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -1546,9 +1544,7 @@ <h2>Environmental Factors</h2>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

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12 changes: 4 additions & 8 deletions docs/communities/AMD_Nitrososphaerota_Archaeal.html
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Original file line number Diff line number Diff line change
Expand Up @@ -694,7 +694,7 @@ <h2>Ecological Interactions</h2>
<div class="legend-item">
<svg class="legend-symbol" width="14" height="14" viewBox="-9 -9 18 18"
aria-hidden="true" data-symbol="symbolSquare"
data-color="#56bbe6"></svg> Mutualism
data-color="#9f2ebb"></svg> Mutualism
</div>
<div class="legend-item">
<svg class="legend-symbol" width="14" height="14" viewBox="-9 -9 18 18"
Expand Down Expand Up @@ -1380,14 +1380,12 @@ <h2>Environmental Factors</h2>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -1400,9 +1398,7 @@ <h2>Environmental Factors</h2>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

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10 changes: 3 additions & 7 deletions docs/communities/ANME_SRB_Anaerobic_Methanotrophic_Syntrophic_Consortia.html
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Expand Up @@ -963,14 +963,12 @@ <h4 style="color: var(--text);">Evidence</h4>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -983,9 +981,7 @@ <h4 style="color: var(--text);">Evidence</h4>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

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10 changes: 3 additions & 7 deletions docs/communities/ANME_SRB_Marine_Methane_Seep_Consortium.html
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Original file line number Diff line number Diff line change
Expand Up @@ -1057,14 +1057,12 @@ <h4 style="color: var(--text);">Evidence</h4>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -1077,9 +1075,7 @@ <h4 style="color: var(--text);">Evidence</h4>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

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10 changes: 3 additions & 7 deletions docs/communities/Aalborg_East_Full_Scale_EBPR_Community.html
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Original file line number Diff line number Diff line change
Expand Up @@ -1039,14 +1039,12 @@ <h4 style="color: var(--text);">Evidence</h4>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -1059,9 +1057,7 @@ <h4 style="color: var(--text);">Evidence</h4>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

Expand Down
10 changes: 3 additions & 7 deletions docs/communities/Acetobacterium_Clostridium_CO2_Electrolysis_Coculture.html
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Original file line number Diff line number Diff line change
Expand Up @@ -1165,14 +1165,12 @@ <h4 style="color: var(--text);">Evidence</h4>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -1185,9 +1183,7 @@ <h4 style="color: var(--text);">Evidence</h4>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

Expand Down
10 changes: 3 additions & 7 deletions docs/communities/Acetylene_Fueled_TCE_Dechlorination_Groundwater_Enrichment.html
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Original file line number Diff line number Diff line change
Expand Up @@ -845,14 +845,12 @@ <h2>Environmental Factors</h2>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -865,9 +863,7 @@ <h2>Environmental Factors</h2>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

Expand Down
10 changes: 3 additions & 7 deletions docs/communities/Aerobic_Denitrification_Disturbance_SynCom.html
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Expand Up @@ -763,14 +763,12 @@ <h4 style="color: var(--text);">Evidence</h4>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -783,9 +781,7 @@ <h4 style="color: var(--text);">Evidence</h4>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

Expand Down
10 changes: 3 additions & 7 deletions docs/communities/Aerobic_Denitrification_QQ_SynCom.html
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Original file line number Diff line number Diff line change
Expand Up @@ -750,14 +750,12 @@ <h4 style="color: var(--text);">Evidence</h4>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -770,9 +768,7 @@ <h4 style="color: var(--text);">Evidence</h4>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

Expand Down
10 changes: 3 additions & 7 deletions docs/communities/Alaska_Tundra_Permafrost_Iron_Redox_Community.html
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Original file line number Diff line number Diff line change
Expand Up @@ -959,14 +959,12 @@ <h4 style="color: var(--text);">Evidence</h4>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -979,9 +977,7 @@ <h4 style="color: var(--text);">Evidence</h4>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

Expand Down
12 changes: 4 additions & 8 deletions docs/communities/Altered_Schaedler_Flora_Gnotobiotic_Mouse_Community.html
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Expand Up @@ -649,7 +649,7 @@ <h2>Ecological Interactions</h2>
<div class="legend-item">
<svg class="legend-symbol" width="14" height="14" viewBox="-9 -9 18 18"
aria-hidden="true" data-symbol="symbolSquare"
data-color="#56bbe6"></svg> Mutualism
data-color="#9f2ebb"></svg> Mutualism
</div>
<div class="legend-item">
<svg class="legend-symbol" width="14" height="14" viewBox="-9 -9 18 18"
Expand Down Expand Up @@ -998,14 +998,12 @@ <h4 style="color: var(--text);">Evidence</h4>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -1018,9 +1016,7 @@ <h4 style="color: var(--text);">Evidence</h4>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

Expand Down
10 changes: 3 additions & 7 deletions docs/communities/Anabaena_MGS1_Anaerobic_Digestion_Methanogen_Consortium.html
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Original file line number Diff line number Diff line change
Expand Up @@ -929,14 +929,12 @@ <h4 style="color: var(--text);">Evidence</h4>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -949,9 +947,7 @@ <h4 style="color: var(--text);">Evidence</h4>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

Expand Down
10 changes: 3 additions & 7 deletions docs/communities/Anammox_Bioreactor_DNRA_Destabilization_Community.html
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Expand Up @@ -807,14 +807,12 @@ <h2>Environmental Factors</h2>
(function() {
var interactionColors = {
"CROSS_FEEDING": "#57c7ab",
"MUTUALISM": "#56bbe6",
"MUTUALISM": "#9f2ebb",
"SYNTROPHY": "#7f30cf",
"COMPETITION": "#a91919",
"COMMENSALISM": "#cf7830",
"NICHE_PARTITIONING": "#1212ed",
"COLONIZATION_FACILITATION": "#edab12",
"STRAIN_COMPETITION": "#cf30b7",
"PREDATION": "#913079"
"COLONIZATION_FACILITATION": "#edab12"
};
var unmappedColor = "#929caa";

Expand All @@ -827,9 +825,7 @@ <h2>Environmental Factors</h2>
"COMPETITION": "symbolTimes",
"COMMENSALISM": "symbolWye",
"NICHE_PARTITIONING": "symbolSquare2",
"COLONIZATION_FACILITATION": "symbolPlus",
"STRAIN_COMPETITION": "symbolAsterisk",
"PREDATION": "symbolStar"
"COLONIZATION_FACILITATION": "symbolPlus"
};
var unmappedSymbol = "symbolTriangle2";

Expand Down
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