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Import loopdetect 2025 python examples - #1

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vmeomeo merged 20 commits into

import-loopdetect-2025-python-examples

Aug 31, 2026

Merged

Import loopdetect 2025 python examples#1
vmeomeo merged 20 commits into
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import-loopdetect-2025-python-examples

Commits on Nov 25, 2025
- Update Python test
  vmeomeo
  committed
  260a28a
Commits on Dec 11, 2025
- Update examples python
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  0b212f7
Commits on Dec 16, 2025
- Add models
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  0991536
Commits on Jan 9, 2026
Commits on Jan 14, 2026
- Update notebooks for each models (1-3)
  vmeomeo
  committed
  5d264fe
Commits on Jan 15, 2026
- Update Python, MATLAB and R notebooks (all results have not yet reproduced in R and MATLAB)
  vmeomeo
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  04a0698
Commits on Jan 21, 2026
- Update notebooks for models (Python): Calcium oscillations and Reduced MAPK
  vmeomeo
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  343776a
Commits on Jan 28, 2026
- Update R reproduction (including pertubation + additional scripts) for model 1; Fix typo at 3.3 addtional function on extended loop summary for Python (Model 1)
  vmeomeo
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  af37ce6
Commits on Jan 31, 2026
- Fix bug
  vmeomeo
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  e60c30d
- Fix bug 2
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  b32e531
Commits on Feb 6, 2026
- Remove test cells
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  68a651b
Commits on Feb 24, 2026
- Fix minor stuffs and some typos
  vmeomeo
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  560bae5
- add MAPK reproduction results (Python)
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  522d15c
- Refine Python notebook for full MAPK model
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  aca15b9
Commits on Apr 23, 2026
- Update notebooks for more analysis
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  1bb37e7
Commits on May 6, 2026
- Update figures and fix minor errors
  vmeomeo
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  3f2daf1
Commits on Aug 31, 2026
- Import LoopDetect 2025 Python examples with history
  vmeomeo
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  5f83771
- Import LoopDetect 2025 Python examples with history
  vmeomeo
  committed
  89bc19b