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Dfam Consortium

Resources for the Study of Transposable Element Families
README.md

Consortium Resources

This is the primary distribution and repository site for Dfam related projects. Each repository contains it's own set of focused documentation. Project level documentation will be made available in our new wiki site.

Popular repositories Loading

  1. RepeatMasker RepeatMasker Public

    RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

    Perl 314 51

  2. RepeatModeler RepeatModeler Public

    De-Novo Repeat Discovery Tool

    Perl 244 28

  3. TETools TETools Public

    Dfam Transposable Element Tools Docker container.

    Perl 106 16

  4. FamDB FamDB Public

    FamDB file format library and utilities

    Python 49 4

  5. AlignmentSummaryViewer AlignmentSummaryViewer Public

    Multiple sequence alignment visualization component

    HTML 7

  6. RepeatMasker_Nextflow RepeatMasker_Nextflow Public

    Nextflow script for running RepeatMasker on a cluster

    Perl 6 1

Repositories

Showing 10 of 28 repositories
  • RMBlast Public
    Dfam-consortium/RMBlast's past year of commit activity
    Rust 0 0 0 0 Updated Sep 5, 2026
  • RepeatModeler Public

    De-Novo Repeat Discovery Tool

    Dfam-consortium/RepeatModeler's past year of commit activity
    Perl 244 28 20 3 Updated Sep 4, 2026
  • RepeatMasker Public

    RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

    Dfam-consortium/RepeatMasker's past year of commit activity
    Perl 314 51 24 3 Updated Sep 4, 2026
  • dfam40-dmel-paper Public
    Dfam-consortium/dfam40-dmel-paper's past year of commit activity
    Perl 0 0 0 0 Updated Sep 2, 2026
  • dfam-curator Public
    Dfam-consortium/dfam-curator's past year of commit activity
    Rust 0 0 0 0 Updated Sep 2, 2026
  • dfam-lib Public
    Dfam-consortium/dfam-lib's past year of commit activity
    Rust 0 CC0-1.0 0 0 0 Updated Aug 27, 2026
  • RepeatAfterMe Public

    A package for the extension of repetitive DNA sequences

    Dfam-consortium/RepeatAfterMe's past year of commit activity
    C 3 CC0-1.0 0 2 0 Updated Aug 26, 2026
  • Smitten Public

    A format for sequence identifiers and reference parsing implementations

    Dfam-consortium/Smitten's past year of commit activity
    Perl 0 CC0-1.0 0 0 0 Updated Aug 21, 2026
  • Dfam-Portal Public

    Angular website for Dfam resource

    Dfam-consortium/Dfam-Portal's past year of commit activity
    TypeScript 1 CC0-1.0 1 0 0 Updated Aug 13, 2026
  • .github Public

    Dfam Consortium Public View

    Dfam-consortium/.github's past year of commit activity
    0 0 0 0 Updated Jul 17, 2026
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