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amr-surveillance-r
amr-surveillance-r PublicR workflow for AMR surveillance: cleans lab and WHONET exports, interprets MIC/disk values (EUCAST/CLSI), prints a CLSI M39 cumulative antibiogram, flags MRSA/VRE/CRE, and validates against real NC…
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breakpoint-drift
breakpoint-drift PublicSeparates real resistance change from breakpoint-revision artefacts in AMR surveillance data. Re-reads historical MICs and zone diameters under CLSI/EUCAST editions, tests each organism-drug pair, …
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kz-health-data-pipeline
kz-health-data-pipeline PublicWeekly R pipeline that pulls Kazakhstan public health indicators from the national statistics bureau (BNS), WHO and the World Bank, and checks where they disagree.
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series-break-backcast
series-break-backcast PublicR tool to extend a statistics series back across a methodology break with four published methods and report how far they disagree. On Kazakhstan's industry value added, the methods differ by 4.3 pp…
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