Issues

• probabel 0.5.0 fails two checks

  GenABEL-Project/ProbABEL#47 · Filter by author tillea opened on Oct 11, 2021
  1

• Conditionally palinear returns results for

  GenABEL-Project/ProbABEL#46 · Filter by author mightyphil2000 opened on Apr 8, 2020
  1

• Problem with reading gzipped dosage files

  awaiting response
  GenABEL-Project/ProbABEL#44 · Filter by author Sodbo opened on May 4, 2017
  4

• make check fails at test_bt.sh and eigen 3.3.1

  bugpalogistv0.5.0
  GenABEL-Project/ProbABEL#37 · Filter by author maarten-k opened on Dec 11, 2016
  6

• Add more information on the --nids option to the documentation

  documentationenhancement
  GenABEL-Project/ProbABEL#30 · Filter by author lckarssen opened on Aug 3, 2016 · v1.0.0

• Allow VCF format for input of genotype data

  enhancementhelp wanted
  GenABEL-Project/ProbABEL#29 · Filter by author amanicha opened on Apr 29, 2016
  1

• The R checks for CoxPH fail with survival package 2.39.2

  bugpacoxphv0.5.0
  GenABEL-Project/ProbABEL#27 · Filter by author lckarssen opened on Apr 23, 2016 · v1.0.0
  2

• Add option to compress output files

  enhancement
  GenABEL-Project/ProbABEL#20 · Filter by author lckarssen opened on Feb 21, 2016 · v1.0.0

• The R checks for linear regression fail when using Eigen > 3.2.1

  bugv0.4.5v0.5.0
  GenABEL-Project/ProbABEL#11 · Filter by author lckarssen opened on Nov 8, 2015 · v1.0.0
  5

• Robust covariances for Cox in ProbABEL

  enhancementpacoxph
  GenABEL-Project/ProbABEL#10 · Filter by author lckarssen opened on Nov 4, 2015
  1

• Covariances between betas for all options in ProbABEL

  enhancement
  GenABEL-Project/ProbABEL#9 · Filter by author lckarssen opened on Nov 4, 2015

• Add p-values to the ProbABEL output

  enhancementin progress
  GenABEL-Project/ProbABEL#8 · Filter by author lckarssen opened on Nov 4, 2015 · v1.0.0
  1

  

• Add an option to ProbABEL that removes SNPs with nan betas from the output

  enhancement
  GenABEL-Project/ProbABEL#7 · Filter by author lckarssen opened on Nov 4, 2015

• Add option to ProbABEL to list logliks in output

  enhancement
  GenABEL-Project/ProbABEL#6 · Filter by author lckarssen opened on Nov 4, 2015

• Add function to PA to re-order phenotype data if necessary

  enhancement
  GenABEL-Project/ProbABEL#4 · Filter by author lckarssen opened on Nov 4, 2015

• Add Plink-like log file to ProbABEL

  enhancement
  GenABEL-Project/ProbABEL#3 · Filter by author lckarssen opened on Nov 4, 2015

• Using --mmscore and --interaction will not output a column with cov_SNP_int_SNP_covariate

  bugv0.4.4
  GenABEL-Project/ProbABEL#2 · Filter by author lckarssen opened on Nov 4, 2015 · v1.0.0

• palinear can't process more than 2 millions SNPs in a dosage file

  enhancementpalinear
  GenABEL-Project/ProbABEL#1 · Filter by author lckarssen opened on Nov 4, 2015