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@Integrative-Transcriptomics

Integrative-Transcriptomics

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  1. DamageProfiler DamageProfiler Public

    A Java based tool to determine damage patterns on ancient DNA as a replacement for mapDamage

    Java 21 3

  2. PTMVision PTMVision Public

    Web application for the interactive visualization and exploration of post-translational modifications of proteins from open and closed search software.

    HTML 7 1

  3. inPHAP inPHAP Public

    Interactive phased haplotype viewer

    Java 6

  4. MUSIAL MUSIAL Public

    Generate comprehensive statistics and alignments, and assess variability at the genome, gene and protein levels, based on VCF files produced from prokaryotic sources.

    Java 5 1

  5. GO-Compass GO-Compass Public

    Visual Navigation of Multiple Lists of GO terms

    JavaScript 4 1

  6. TechnicalReport-AssemblyBestPractice TechnicalReport-AssemblyBestPractice Public

    In this technical report we elucidate/evaluate best practices for hybrid/long-read assembly.

    Jupyter Notebook 3

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