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Export metadata and feature data tables #34

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Export metadata and feature data tables #34

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564bd27
Adding data exporter functionality
epbrenner Jul 28, 2026
7cd8f95
Adding example data for export testing
epbrenner Jul 28, 2026
5a944a9
Updated variable/function names
epbrenner Jul 29, 2026
6ecae92
Merge branch 'main' into export_tables
jananiravi Jul 29, 2026
c082308
Apply suggestion from @eboyer221
epbrenner Jul 31, 2026
66038e3
Code review fixes
epbrenner Jul 31, 2026
7a59169
Merge branch 'main' into export_tables
jananiravi Aug 2, 2026
e4acc7b
regenerated namespace and Rd files
jananiravi Aug 2, 2026
53e230d
Update R/data_curation.R
epbrenner Aug 4, 2026
d1ed48c
Applying fixes from code review
epbrenner Aug 4, 2026
5b7f19e
Merge branch 'export_tables' of https://github.com/JRaviLab/amRdata i…
epbrenner Aug 4, 2026
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1 change: 1 addition & 0 deletions DESCRIPTION
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Expand Up @@ -53,5 +53,6 @@ biocViews: GenomeAssembly, Annotation, Sequencing
VignetteBuilder: knitr
Suggests:
rmarkdown,
writexl,
testthat (>= 3.0.0)
Config/roxygen2/version: 8.0.0
2 changes: 2 additions & 0 deletions NAMESPACE
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Expand Up @@ -6,6 +6,8 @@ export(CDHIT2duckdb)
export(buildClusterFeatureMap)
export(cleanData)
export(cleanMetaData)
export(exportProcessedData)
export(exportTables)
export(generatePlots)
export(generateSummary)
export(prepareGenomes)
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