Input format

[amomin-pact]

Hi Rohit,
I was trying to use the 'predict' method from mhcnuggets. Currently based on the user_guide notebook one can only provide the peptide sequence as a file. Is there an option to provide the peptide sequences as a list or any other python data structure.

Thanks
Amin

[richelbilderbeek]

Hi Amin,

AFAICS, MHCnuggets does not allow to do so. If you enjoy R, you may enjoy mhcnuggetsr, which does allow you to do so. Disclaimer: I am the author of that R package.