Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Type
/
to search
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
RaredonLab
/
TissuePlex
Public
Notifications
You must be signed in to change notification settings
Fork
9
Star
0
Code
Issues
0
Pull requests
0
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Projects
Security and quality
Insights
dev to main v0.8.0
- #52
#52
Merged
RaredonLab
merged 24 commits into
main
RaredonLab/TissuePlex:main
from
dev
RaredonLab/TissuePlex:dev
Copy head branch name to clipboard
Aug 6, 2026
Conversation
Commits
24
(24)
Checks
Files changed
Merged
dev to main v0.8.0
#52
RaredonLab
merged 24 commits into
main
RaredonLab/TissuePlex:main
from
dev
RaredonLab/TissuePlex:dev
Copy head branch name to clipboard
Commits
Commits on Jun 1, 2026
Merge pull request #44 from RaredonLab/main
Show description for 79146bc
RaredonLab
authored
79146bc
View commit details
Copy full SHA for 79146bc
Browse repository at this point
Commits on Jul 14, 2026
feat: edge-file dropdown to flip between multiple edges.parquet (#46)
Show description for d117dd6
noahwang1991
and
claude
committed
d117dd6
View commit details
Copy full SHA for d117dd6
Browse repository at this point
Merge pull request #47 from noahwang1991/dev
Show description for cdad74f
noahwang1991
authored
cdad74f
View commit details
Copy full SHA for cdad74f
Browse repository at this point
Commits on Aug 4, 2026
feat: discover morphology images in subdirectories
Show description for 9fde747
msraredon
and
claude
committed
9fde747
View commit details
Copy full SHA for 9fde747
Browse repository at this point
docs: align CLAUDE.md and README with shipped code; archive superseded plans; v0.4.0
Show description for 700ba38
msraredon
and
claude
committed
700ba38
View commit details
Copy full SHA for 700ba38
Browse repository at this point
perf: stream transcript and boundary queries through DuckDB
Show description for 5900569
msraredon
and
claude
committed
5900569
View commit details
Copy full SHA for 5900569
Browse repository at this point
docs: propose seqFISH (Spatial Genomics GenePS) support
Show description for aa7ad54
msraredon
and
claude
committed
aa7ad54
View commit details
Copy full SHA for aa7ad54
Browse repository at this point
Commits on Aug 5, 2026
test: golden-output guard; lift supplemental metadata to the base reader
Show description for d4406a9
msraredon
and
claude
committed
d4406a9
View commit details
Copy full SHA for d4406a9
Browse repository at this point
feat: seqFISH (Spatial Genomics GenePS) support
Show description for 6d0549c
msraredon
and
claude
committed
6d0549c
View commit details
Copy full SHA for 6d0549c
Browse repository at this point
Commits on Aug 6, 2026
feat: supplemental edge metadata (edge-metadata/ folder)
Show description for 8686f96
msraredon
and
claude
committed
8686f96
View commit details
Copy full SHA for 8686f96
Browse repository at this point
chore: v0.6.0
Show description for 2d0bc6c
msraredon
and
claude
committed
2d0bc6c
View commit details
Copy full SHA for 2d0bc6c
Browse repository at this point
Merge pull request #48 from msraredon/dev
Show description for 8982971
msraredon
authored
8982971
View commit details
Copy full SHA for 8982971
Browse repository at this point
perf: spatial index cache for transcript and boundary queries
Show description for ce2ef66
msraredon
and
claude
committed
ce2ef66
View commit details
Copy full SHA for ce2ef66
Browse repository at this point
feat: Visium HD support against real Space Ranger output
Show description for 794ffad
msraredon
and
claude
committed
794ffad
View commit details
Copy full SHA for 794ffad
Browse repository at this point
docs: correct the edges.parquet spec against the actual NICHESv2 writer
Show description for 8a432fb
msraredon
and
claude
committed
8a432fb
View commit details
Copy full SHA for 8a432fb
Browse repository at this point
feat: per-platform NICHESv2 scripts, run against the demo datasets
Show description for 399fe5e
msraredon
and
claude
committed
399fe5e
View commit details
Copy full SHA for 399fe5e
Browse repository at this point
chore: v0.7.0
Show description for a131416
msraredon
and
claude
committed
a131416
View commit details
Copy full SHA for a131416
Browse repository at this point
Merge pull request #49 from msraredon/dev
Show description for 7202c8a
msraredon
authored
7202c8a
View commit details
Copy full SHA for 7202c8a
Browse repository at this point
fix: CosMx and MERSCOPE against real public data
Show description for d2fafd9
msraredon
and
claude
committed
d2fafd9
View commit details
Copy full SHA for d2fafd9
Browse repository at this point
fix: render datasets that ship no morphology image
Show description for 94a4009
msraredon
and
claude
committed
94a4009
View commit details
Copy full SHA for 94a4009
Browse repository at this point
chore: v0.7.1
Show description for ca15d99
msraredon
and
claude
committed
ca15d99
View commit details
Copy full SHA for ca15d99
Browse repository at this point
Merge pull request #50 from msraredon/dev
Show description for b693261
msraredon
authored
b693261
View commit details
Copy full SHA for b693261
Browse repository at this point
feat: metadata filtering (#45) and force-categorical toggle (#35)
Show description for b27ee5e
msraredon
and
claude
committed
b27ee5e
View commit details
Copy full SHA for b27ee5e
Browse repository at this point
Merge pull request #51 from msraredon/dev
Show description for 56587f5
RaredonLab
authored
56587f5
View commit details
Copy full SHA for 56587f5
Browse repository at this point
You can’t perform that action at this time.