Repository navigation

Changes to CONTRIBUTING guide - #57

Draft

annaritz wants to merge 38 commits into

mainfrom

docs

Draft

Changes to CONTRIBUTING guide#57
annaritz wants to merge 38 commits into
mainfrom
docs

Commits on Jan 29, 2026
- partway through contrib guide
  annaritz
  committed
  cb55710
- finished reading through CONTRIBUTING
  annaritz
  committed
  68234cc
- adding some last changes.
  annaritz
  committed
  0dcaf08
Commits on Jan 30, 2026
- apply suggestions, formatting changes
  tristan-f-r
  committed
  12d3b8b
- style: fmt
  tristan-f-r
  committed
  c16c33c
- docs: add argument documentation to non-obvious args
  tristan-f-r
  committed
  c703c08
Commits on Mar 18, 2026
- chore: drop other datasets
  tristan-f-r
  committed
  b49439e
- Merge branch 'main' into egfr-and-infrastructure
  tristan-f-r
  committed
  2018a13
- chore: re-include
  tristan-f-r
  committed
  136e5ff
- chore: drop tools
  tristan-f-r
  committed
  472468d
- chore: re-add tools
  tristan-f-r
  committed
  a5de971
- docs: cache
  tristan-f-r
  committed
  8ddccb4
- style: fmt
  tristan-f-r
  committed
  90cc277
- docs: on caching
  tristan-f-r
  committed
  eb23b8f
- docs: suggestions from review
  
  tristan-f-r
  and
  ntalluri
  authored
  4b524bc
Commits on Mar 19, 2026
- docs: more comments, refactor: mv function out of Snakefile
  tristan-f-r
  committed
  69fda05
- docs(datasets): mention responsenet and egfr
  tristan-f-r
  committed
  15c7ecb
- docs(datasets): add old synthetic data branch
  tristan-f-r
  committed
  729a51b
Commits on Mar 23, 2026
- chore: mv to scores instead of dmmm
  tristan-f-r
  committed
  922be5d
- docs: drop expiration docs
  tristan-f-r
  committed
  f3d6d41
- docs: clarify snakemake importing
  tristan-f-r
  committed
  a802fde
Commits on Mar 24, 2026
- docs: more clarification on data and files
  tristan-f-r
  committed
  85ba6e9
- refactor: move irefindex back to egfr
  tristan-f-r
  committed
  8139f14
- chore: revert web
  tristan-f-r
  committed
  5a8c02e
- docs: clarify on cache
  tristan-f-r
  committed
  041f998
Commits on Mar 25, 2026
- chore: apply suggestions
  
  tristan-f-r
  and
  ntalluri
  authored
  bd3bcab
- docs: apply suggestions
  tristan-f-r
  committed
  c08a0b8
- chore: apply suggestions
  tristan-f-r
  committed
  b3cf691
- drop extensions
  tristan-f-r
  committed
  193f75a
- refactor(egfr): correctly specify output dirs
  tristan-f-r
  committed
  0581bea
Commits on Mar 26, 2026
- feat(egfr): add target nodes, fmt
  tristan-f-r
  committed
  320aa87
- feat: archived biomart url
  tristan-f-r
  committed
  f696c6d
- docs: apply suggestion
  
  tristan-f-r
  and
  ntalluri
  authored
  998030b
- docs: apply more suggestions, fix config, unfix magic value
  tristan-f-r
  committed
  040a62e
- Merge branch 'egfr-and-infrastructure' of https://github.com/Reed-CompBio/spras-benchmarking into egfr-and-infrastructure
  tristan-f-r
  committed
  c18d841
- Merge branch 'egfr-and-infrastructure' into docs
  tristan-f-r
  committed
  d556f6c
- move contributing over
  tristan-f-r
  committed
  0063ae2
- Merge branch 'egfr-and-infrastructure' into docs
  tristan-f-r
  committed
  ed3c06b

Commits

Commits on Jan 29, 2026

Commits on Jan 30, 2026

Commits on Mar 18, 2026

Commits on Mar 19, 2026

Commits on Mar 23, 2026

Commits on Mar 24, 2026

Commits on Mar 25, 2026

Commits on Mar 26, 2026