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@XSLiuLab

XSLiuLab

Research group led by Xue-Song Liu in ShanghaiTech. University

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  1. Workshop Workshop Public

    课题组每周研讨会

    HTML 210 52

  2. tumor-immunogenicity-score tumor-immunogenicity-score Public

    TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020

    R 33 16

  3. PC_CNA_signature PC_CNA_signature Public

    Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/

    R 13 7

  4. ecDNA_immune ecDNA_immune Public

    Extrachromosomal DNA is associated with decreased immune cell infiltration and antigen presentation, represents a potential cancer immune evasion mechanism

    HTML 8 3

  5. Immunoediting Immunoediting Public

    Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution

    HTML 14 2

  6. Neodb Neodb Public

    Shiny Web Server and Database for Neoantigen discovery

    Jupyter Notebook 4

Repositories

Showing 10 of 45 repositories
  • CNAfingerprint Public

    CNAfingerprint

    XSLiuLab/CNAfingerprint's past year of commit activity
    R 0 Apache-2.0 0 0 0 Updated Jan 20, 2026
  • DeepMeta Public

    Precise metabolic dependencies of cancer through deep learning

    XSLiuLab/DeepMeta's past year of commit activity
    Jupyter Notebook 5 MIT 2 0 0 Updated Jan 7, 2026
  • CNAfingerprint_mCRC Public

    CNAfingerprint, A biomarker for oxaliplatin-based chemotherapy response prediction in mCRC

    XSLiuLab/CNAfingerprint_mCRC's past year of commit activity
    1 0 0 0 Updated Nov 20, 2025
  • Neodb Public

    Shiny Web Server and Database for Neoantigen discovery

    XSLiuLab/Neodb's past year of commit activity
    Jupyter Notebook 4 MIT 0 0 0 Updated Aug 18, 2025
  • single-cell-CNA-signature Public

    This repository provides the analysis reports, code and data for readers who are insterest in this project and make it easier to reproduce the whole analysis procedure.

    XSLiuLab/single-cell-CNA-signature's past year of commit activity
    R 3 1 0 0 Updated Aug 2, 2025
  • AbTcrAI Public

    AbTcrAI web

    XSLiuLab/AbTcrAI's past year of commit activity
    HTML 0 0 0 0 Updated May 29, 2025
  • XSLiuLab/CNV_lcWGS_benchmark's past year of commit activity
    0 0 0 0 Updated Apr 9, 2025
  • XSLiuLab/CNAfingerprint_demo's past year of commit activity
    0 0 0 0 Updated Jan 1, 2025
  • TcrDesign Public

    T Cell Receptor Design Through Deep Learning Methods

    XSLiuLab/TcrDesign's past year of commit activity
    Python 5 0 0 0 Updated Dec 25, 2024
  • CancerBiology Public

    Support materials for 《Cancer Biology》,Shanghaitech University

    XSLiuLab/CancerBiology's past year of commit activity
    JavaScript 1 0 0 0 Updated Dec 23, 2024

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