Issues

• CUDA out of memory

  ZJUFanLab/scNiche#28 · Filter by author yitengfei120011 opened on Feb 28, 2026
  1

• model = sn.tr.Runner(adata=adata, device='cuda:0', verbose=False)

  ZJUFanLab/scNiche#27 · Filter by author yitengfei120011 opened on Feb 28, 2026
  1

• Multi-slice analysis of deconvolved Visium data without ground truth regions/celltypes

  ZJUFanLab/scNiche#26 · Filter by author mbaardwijk opened on Feb 3, 2026
  1

• Discrepancy between Manuscript Formula (2) and code for MGAE

  ZJUFanLab/scNiche#25 · Filter by author yinhechai opened on Jan 1, 2026
  2

• No module named 'scniche'

  ZJUFanLab/scNiche#24 · Filter by author Sophielsn opened on Nov 13, 2025
  7

• Celltype granularity

  ZJUFanLab/scNiche#23 · Filter by author Thapeachydude opened on Sep 30, 2025
  1

• Is it compatible with silicon chip

  ZJUFanLab/scNiche#16 · Filter by author ankitbioinfo opened on Jul 10, 2025
  1

• Recommendations for multi-modal, multi-slice spatial data

  ZJUFanLab/scNiche#9 · Filter by author Thapeachydude opened on Apr 23, 2025
  5