Capstone

This repository contains all the materials used for the MATH 499 course and has code implementation of experiemnts described in paper.

Name		Name	Last commit message	Last commit date
data		data
DeepFam_comparison.png		DeepFam_comparison.png
ProtVec.ipynb		ProtVec.ipynb
README.md		README.md
Screen Shot 2020-04-08 at 16.21.04.png		Screen Shot 2020-04-08 at 16.21.04.png
Screen Shot 2020-04-08 at 22.59.51.png		Screen Shot 2020-04-08 at 22.59.51.png
Top 10 pairplot.png		Top 10 pairplot.png
asgari.model		asgari.model
classification for top 25 .png		classification for top 25 .png
countplot for 1000-1025.png		countplot for 1000-1025.png
countplot for top 25 families.png		countplot for top 25 families.png
distribution of legth of all.png		distribution of legth of all.png
distribution of length for the top 25.png		distribution of length for the top 25.png
doc2vec_pvdm.png		doc2vec_pvdm.png
family_classification_and_sequence_small.tab		family_classification_and_sequence_small.tab
model_SwissProt_small2		model_SwissProt_small2
pairplot for top 25.png		pairplot for top 25.png
prot_class.png		prot_class.png
swissprot-reviewed-protvec (2).model		swissprot-reviewed-protvec (2).model
trial 2- 3 classes-93%.ipynb		trial 2- 3 classes-93%.ipynb
uniprot_sprot_small.fasta		uniprot_sprot_small.fasta

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