Issues

• Update to fractal-task-tools >=0.4

  fmi-basel/Mantis-plex#156 · Filter by author jluethi opened on Jun 5, 2026

• Drop fractal-tasks-core dependency

  fmi-basel/Mantis-plex#155 · Filter by author jluethi opened on Jun 5, 2026

• Dask deprecates Overwrite argument

  fmi-basel/Mantis-plex#151 · Filter by author nrepina opened on Jan 27, 2026

• Update README

  fmi-basel/Mantis-plex#125 · Filter by author jluethi opened on Dec 10, 2024
  2

• Update to VTK 9.4.0

  fmi-basel/Mantis-plex#124 · Filter by author jluethi opened on Dec 10, 2024
  1

• Update scmultiplex README

  fmi-basel/Mantis-plex#121 · Filter by author jluethi opened on Aug 22, 2024

• Test measurements for tiny objects

  fmi-basel/Mantis-plex#101 · Filter by author jluethi opened on Jan 8, 2024
  1

• Bug in plot_image_grid plotting function

  fmi-basel/Mantis-plex#100 · Filter by author nrepina opened on Dec 13, 2023

• Max wishlist

  enhancement
  fmi-basel/Mantis-plex#97 · Filter by author nrepina opened on Nov 8, 2023
  

• Output euclidian distances before transformation in run_affine function

  enhancement
  fmi-basel/Mantis-plex#89 · Filter by author nrepina opened on Sep 6, 2023
  

• Improve logging when user makes input mistake in scmpx Fractal task

  low priority
  fmi-basel/Mantis-plex#84 · Filter by author nrepina opened on Jul 20, 2023
  4

  

• Skeleton features

  enhancement
  fmi-basel/Mantis-plex#78 · Filter by author MauriceKahnwald opened on Jun 7, 2023

• Enhance nuclear linking exception handling

  fmi-basel/Mantis-plex#73 · Filter by author enricotagliavini opened on May 31, 2023

• Check for scikit-image version and apply the fix for centroid for version 0.20.0

  fmi-basel/Mantis-plex#69 · Filter by author enricotagliavini opened on May 26, 2023

• Fractal task adds duplicate columns

  bug
  fmi-basel/Mantis-plex#67 · Filter by author jluethi opened on May 2, 2023
  

• Add neighbor analysis to FeatureExtraction.py

  enhancement
  fmi-basel/Mantis-plex#64 · Filter by author nrepina opened on Apr 19, 2023
  1

• Testing of different experiment settings

  fmi-basel/Mantis-plex#63 · Filter by author nrepina opened on Apr 19, 2023

• Print summary at the end of nuc to mem linking

  enhancement
  fmi-basel/Mantis-plex#58 · Filter by author enricotagliavini opened on Apr 18, 2023

• More testing for 01 task parallelization

  fmi-basel/Mantis-plex#46 · Filter by author enricotagliavini opened on Mar 24, 2023

• Add a check for step dependencies ?

  enhancementlow priority
  fmi-basel/Mantis-plex#34 · Filter by author enricotagliavini opened on Mar 20, 2023

• Add support for cluster submission

  enhancement
  fmi-basel/Mantis-plex#31 · Filter by author enricotagliavini opened on Mar 15, 2023

• Maurice wish list of features

  enhancementlow priority
  fmi-basel/Mantis-plex#23 · Filter by author nrepina opened on Mar 8, 2023
  

• Consider adding q1 to fixed_percentiles and custom list passing option

  enhancementlow priority
  fmi-basel/Mantis-plex#22 · Filter by author nrepina opened on Mar 8, 2023