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@LJPZebra @orger-lab @BioCommons-Lab @kramvesha-systems

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  1. MikroBirdDrishti MikroBirdDrishti Public

    A high-speed image acquisition program written in C# which combines a MIKROTRON MC4082 camera with a FIREBIRD frame grabber board of Active Silicon.

    C#

  2. leakage-safe-tabular-regression leakage-safe-tabular-regression Public

    Leakage-aware tabular regression with Optuna-tuned XGBoost and nested model stacking.

    Python

  3. cosmometer cosmometer Public

    A simple cosmic event detection tool that uses digital camera sensors (CMOS or CCD) to detect muons, cosmic rays, and other high-energy particle interactions.

    Python 2

  4. HT-LMD HT-LMD Public

    High-Throughput Learning, Memory and Drug-Testing Platform for Small Aquatic Models

    MATLAB

  5. WIDE-CAT WIDE-CAT Public

    A low-cost, open-source toolbox for widefield calcium imaging and voxel-based analysis, with optional structural enhancement via deconvolution or computational sectioning.

    MATLAB

  6. show4Dbrain show4Dbrain Public

    Memory-efficient PyQt viewer for large 4D image stacks (HDF5/MATLAB v7.3): scrub Z and time, drop ROIs, and read raw + rolling-baseline dF/F traces with stimulus shading.

    Python