skills-science-upload

Claude skills for preparing and uploading data, and other materials, to public repositories and sites.

Skills

Skill	What it does	Version
upload-ncbi-sra	Fill NCBI BioSample and SRA submission templates from curated metadata, validate cross-links, and check and demultiplex FASTQ files	1.00

Install

Skills run with full agent permissions, so read a skill before using it.

With npx (Node.js)

Installs into the current project (./.claude/skills/); tested with Claude Code. Omit --skill and -a to choose interactively.

npx skills add kenscripts/skills-science-upload --list
npx skills add kenscripts/skills-science-upload --skill upload-ncbi-sra -a claude-code -y

As a marketplace (Claude app)

In Claude, open the plugin settings, choose Add marketplace and paste this URL. Skills are then installed from it and updated when the repository changes.

https://github.com/kenscripts/skills-science-upload

Manually

Clone, then copy into ~/.claude/skills/ for all projects or <project>/.claude/skills/ for one project. Use ln -s instead of cp -r to follow git pull.

git clone https://github.com/kenscripts/skills-science-upload.git
mkdir -p ~/.claude/skills
cp -r skills-science-upload/upload-ncbi-sra ~/.claude/skills/