Simple interface for opening, viewing and saving cropped subsections of Whole Slide digital pathology images using the openslide python API. Built around summer 2015, since I couldn't find a good way to view SVS files without the ScanScope software. Major workflow limitation. Bad.
- Pop-up menu image selection
- Interface with the image pane by dragging a window to crop
- Refine the crop rectangle by specifying (top, top): (size, size)
- Image pane rectangle should update accordingly
- Save the selected area to a new file in whatever formats suppored by
PIL - Multiple ways to quick-exit - even where you might not expect ;)
- Tested with Aperio's SVS file type, should work for others... but info might not be as expected
- Python 2.7
- numpy
- python-imaging-tk
- PIL
- Tkinter
- Mouse-wheel zooming
- Zooming of any kind, really.