pubmedqa

Here are 9 public repositories matching this topic...

LukasDrews97 / Gemma-4-IT-SFT-RLVR-Medical

Gemma-4-It fine-tuned on PubMedQA using SFT & RLVR

quantization fine-tuning sft llm low-rank-adaptation qlora parameter-efficient-fine-tuning grpo gguf-quantization rlvr pubmedqa gemma-4

Updated Apr 27, 2026
Python

rishika7006 / citemd

Star

Open-source clinical-evidence RAG with grounded citations and calibrated abstention, evaluated on MIRAGE. Measured trustworthiness: risk-coverage, calibration, citation faithfulness. Research and evaluation only, not for clinical use.

information-retrieval evaluation calibration mirage rag clinical-nlp abstention llm medical-nlp pgvector retrieval-augmented-generation pubmedqa

Updated Jul 9, 2026
Python

thirtysix / biomedical-RAFT-toolkit

Star

Fine-tune language models to cite sources and quote evidence using RAFT (Retrieval-Augmented Fine-Tuning) on biomedical QA datasets (PubMedQA, BioASQ).

python nlp deep-learning raft question-answering language-models biomedical fine-tuning rag bioasq llm biomedical-nlp retrieval-augmented-generation pubmedqa evidence-grounding

Updated Jul 22, 2026
Python

vardhjain / Knowledge_Graph_Question_Answering

Star

Archived fork — canonical version moved to vardhjain/graphrag-pubmedqa-ablation.

python knowledge-graph arangodb rag streamlit ablation-study llm biomedical-nlp ollama graphrag pubmedqa

Updated Jul 6, 2026
Python

Abeera-khurram / MedVerify

Star

Independent multi-agent framework for verifying AI-generated medical diagnoses using specialized verifier agents and persistent memory.

machine-learning ai multi-agent-systems ai-safety medical-ai llm chromadb ai-verification agentic-ai pubmedqa

Updated Aug 15, 2026
Python

nikhilll30 / pubmedqa-finetune

Star

Fine-tuned BiomedBERT on PubMedQA for 3-class biomedical question answering (yes/no/maybe) · Streamlit demo · HuggingFace Hub

nlp deep-learning text-classification transformers pytorch question-answering bert fine-tuning huggingface streamlit biomedical-nlp pubmedqa

Updated Apr 7, 2026
Jupyter Notebook

gbadedata / biomedical-rag-qa

Star

Retrieval-augmented QA over biomedical literature: a reusable pipeline (ingest, retrieve, generate, evaluate) with BM25 and dense FAISS retrieval, grounded LLM answers, REST and GraphQL ingestion, and baseline-benchmarked evaluation on PubMedQA.

python nlp information-retrieval pubmed embeddings healthcare question-answering semantic-search biomedical bm25 faiss rag vector-search llm biomedical-nlp anthropic retrieval-augmented-generation pubmedqa

Updated Jul 2, 2026
Python

vardhjain / graphrag-pubmedqa-ablation

Star

GraphRAG vs PlainRAG ablation on PubMedQA. Parent expansion wins +22.5pp (McNemar p<0.0001). Leakage-free, 4-arm design.

python knowledge-graph arangodb rag streamlit ablation-study llm biomedical-nlp ollama graphrag pubmedqa

Updated Jul 17, 2026
Python

PriyaDas258 / llm-biomedical-finetuning-lab

Star

Fine-tune TinyLlama, Phi-2, and Mistral on PubMedQA using LoRA/QLoRA — side-by-side base vs fine-tuned comparison with Streamlit UI

lora biomedical fine-tuning peft huggingface streamlit llm generative-ai qlora pubmedqa

Updated Mar 25, 2026
Python

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