End-to-end germline NGS analysis pipeline using FastQC, BWA-MEM, SAMtools, BCFtools and Ensembl VEP on GRCh38.
linux bioinformatics ngs wsl variant-calling illumina vep samtools bwa bcftools ngs-pipeline fastqc germline-variants variant-interpretation human-genetics human-genetic-variants wsl-installation veptools wsl-package
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Updated
Aug 16, 2026 - Python