mzR has been built against a different Rcpp version (1.0.9)
than is installed on your system (1.0.12). This might lead to errors
when loading mzR. If you encounter such issues, please send a report,
including the output of sessionInfo() to the Bioc support forum at
https://support.bioconductor.org/. For details see also
https://github.com/sneumann/mzR/wiki/mzR-Rcpp-compiler-linker-issue.
sessionInfo()
R version 4.2.3 (2023-03-15)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS 14.3.1
Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats4 stats graphics grDevices utils datasets methods base
other attached packages:
[1] OptiLCMS_1.1.0 MSnbase_2.24.2 ProtGenerics_1.30.0 S4Vectors_0.36.2
[5] mzR_2.32.0 Rcpp_1.0.12 BiocParallel_1.32.6 Biobase_2.58.0
[9] BiocGenerics_0.44.0
loaded via a namespace (and not attached):
[1] vsn_3.66.0 foreach_1.5.2 Formula_1.2-5
[4] BiocManager_1.30.22 affy_1.76.0 RBGL_1.74.0
[7] ggrepel_0.9.5 impute_1.72.3 progress_1.2.3
[10] pillar_1.9.0 backports_1.4.1 lattice_0.22-5
[13] glue_1.7.0 limma_3.54.2 digest_0.6.34
[16] RColorBrewer_1.1-3 checkmate_2.3.1 colorspace_2.1-0
[19] htmltools_0.5.7 preprocessCore_1.60.2 plyr_1.8.9
[22] MALDIquant_1.22.2 XML_3.99-0.16.1 pkgconfig_2.0.3
[25] zlibbioc_1.44.0 rsm_2.10.4 scales_1.3.0
[28] affyio_1.68.0 tibble_3.2.1 htmlTable_2.4.2
[31] generics_0.1.3 IRanges_2.32.0 ggplot2_3.5.0
[34] nnet_7.3-19 cli_3.6.2 RJSONIO_1.3-1.9
[37] magrittr_2.0.3 crayon_1.5.2 evaluate_0.23
[40] ncdf4_1.22 fansi_1.0.6 doParallel_1.0.17
[43] MASS_7.3-60.0.1 foreign_0.8-86 graph_1.76.0
[46] Cairo_1.6-2 data.table_1.15.2 tools_4.2.3
[49] prettyunits_1.2.0 hms_1.1.3 lifecycle_1.0.4
[52] stringr_1.5.1 munsell_0.5.0 cluster_2.1.6
[55] entropy_1.3.1 pcaMethods_1.90.0 compiler_4.2.3
[58] mzID_1.36.0 rlang_1.1.3 grid_4.2.3
[61] iterators_1.0.14 rstudioapi_0.15.0 MsCoreUtils_1.10.0
[64] htmlwidgets_1.6.4 rmarkdown_2.25 base64enc_0.1-3
[67] gtable_0.3.4 codetools_0.2-19 DBI_1.2.2
[70] R6_2.5.1 gridExtra_2.3 knitr_1.45
[73] dplyr_1.1.4 fastmap_1.1.1 utf8_1.2.4
[76] clue_0.3-65 Hmisc_5.1-1 stringi_1.8.3
[79] parallel_4.2.3 vctrs_0.6.5 rpart_4.1.23
[82] tidyselect_1.2.0 xfun_0.42
Can you helo me to solve this issue? Thanks
mzR has been built against a different Rcpp version (1.0.9)
than is installed on your system (1.0.12). This might lead to errors
when loading mzR. If you encounter such issues, please send a report,
including the output of sessionInfo() to the Bioc support forum at
https://support.bioconductor.org/. For details see also
https://github.com/sneumann/mzR/wiki/mzR-Rcpp-compiler-linker-issue.
Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats4 stats graphics grDevices utils datasets methods base
other attached packages:
[1] OptiLCMS_1.1.0 MSnbase_2.24.2 ProtGenerics_1.30.0 S4Vectors_0.36.2
[5] mzR_2.32.0 Rcpp_1.0.12 BiocParallel_1.32.6 Biobase_2.58.0
[9] BiocGenerics_0.44.0
loaded via a namespace (and not attached):
[1] vsn_3.66.0 foreach_1.5.2 Formula_1.2-5
[4] BiocManager_1.30.22 affy_1.76.0 RBGL_1.74.0
[7] ggrepel_0.9.5 impute_1.72.3 progress_1.2.3
[10] pillar_1.9.0 backports_1.4.1 lattice_0.22-5
[13] glue_1.7.0 limma_3.54.2 digest_0.6.34
[16] RColorBrewer_1.1-3 checkmate_2.3.1 colorspace_2.1-0
[19] htmltools_0.5.7 preprocessCore_1.60.2 plyr_1.8.9
[22] MALDIquant_1.22.2 XML_3.99-0.16.1 pkgconfig_2.0.3
[25] zlibbioc_1.44.0 rsm_2.10.4 scales_1.3.0
[28] affyio_1.68.0 tibble_3.2.1 htmlTable_2.4.2
[31] generics_0.1.3 IRanges_2.32.0 ggplot2_3.5.0
[34] nnet_7.3-19 cli_3.6.2 RJSONIO_1.3-1.9
[37] magrittr_2.0.3 crayon_1.5.2 evaluate_0.23
[40] ncdf4_1.22 fansi_1.0.6 doParallel_1.0.17
[43] MASS_7.3-60.0.1 foreign_0.8-86 graph_1.76.0
[46] Cairo_1.6-2 data.table_1.15.2 tools_4.2.3
[49] prettyunits_1.2.0 hms_1.1.3 lifecycle_1.0.4
[52] stringr_1.5.1 munsell_0.5.0 cluster_2.1.6
[55] entropy_1.3.1 pcaMethods_1.90.0 compiler_4.2.3
[58] mzID_1.36.0 rlang_1.1.3 grid_4.2.3
[61] iterators_1.0.14 rstudioapi_0.15.0 MsCoreUtils_1.10.0
[64] htmlwidgets_1.6.4 rmarkdown_2.25 base64enc_0.1-3
[67] gtable_0.3.4 codetools_0.2-19 DBI_1.2.2
[70] R6_2.5.1 gridExtra_2.3 knitr_1.45
[73] dplyr_1.1.4 fastmap_1.1.1 utf8_1.2.4
[76] clue_0.3-65 Hmisc_5.1-1 stringi_1.8.3
[79] parallel_4.2.3 vctrs_0.6.5 rpart_4.1.23
[82] tidyselect_1.2.0 xfun_0.42
Can you helo me to solve this issue? Thanks