inferring regulatory cellular dynamics
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Oct 21, 2026 - Python
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grn-inference
Here are 6 public repositories matching this topic...
VCBench: capability-stratified benchmark for single-cell foundation models
benchmark machine-learning bioinformatics deep-learning scrna-seq reproducibility transcriptomics single-cell gene-regulatory-networks foundation-models grn-inference perturbation-prediction cross-species-transfer virtual-cells virtual-cell-models
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Jun 24, 2026 - Python
This is the repository for the code to simulate and use TwINFER framework for inferring gene regulatory network. It contains scripts for simulation, analyzing simulations and making plots for figures.
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Oct 25, 2026 - Python
Cell-type-resolved gene regulatory network inference from single-cell data.
bioinformatics transcription-factors computational-biology gene-expression scrna-seq single-cell motif-analysis gene-regulatory-network cistrome grn-inference piaso regulon regulon-activity-scoring
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Aug 24, 2026 - Python
Gene regulator network inference on Tabular Muris Senis data using a SINDy based approach
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Apr 2, 2026 - Jupyter Notebook
Time-resolved spatial-unit-specific gene regulatory network inference
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Jul 29, 2026 - Python
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